Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABNP31_RS24100 Genome accession   NZ_CP157874
Coordinates   5402660..5403061 (-) Length   133 a.a.
NCBI ID   WP_003257770.1    Uniprot ID   A0AAI8FHY9
Organism   Pseudomonas asiatica strain C-B8A     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5397660..5408061
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNP31_RS24085 (ABNP31_24075) - 5399630..5401654 (-) 2025 WP_238067653.1 methyl-accepting chemotaxis protein -
  ABNP31_RS24090 (ABNP31_24080) - 5401696..5402250 (-) 555 WP_025340905.1 chemotaxis protein CheW -
  ABNP31_RS24095 (ABNP31_24085) pilH 5402247..5402612 (-) 366 WP_025340906.1 twitching motility response regulator PilH -
  ABNP31_RS24100 (ABNP31_24090) pilG 5402660..5403061 (-) 402 WP_003257770.1 response regulator Regulator
  ABNP31_RS24105 (ABNP31_24095) gshB 5403359..5404312 (+) 954 WP_085663498.1 glutathione synthase -
  ABNP31_RS24110 (ABNP31_24100) - 5404404..5405309 (+) 906 WP_075046591.1 energy transducer TonB -
  ABNP31_RS24115 (ABNP31_24105) - 5405481..5406050 (+) 570 WP_015272081.1 YqgE/AlgH family protein -
  ABNP31_RS24120 (ABNP31_24110) ruvX 5406050..5406487 (+) 438 WP_013974530.1 Holliday junction resolvase RuvX -
  ABNP31_RS24125 (ABNP31_24115) pyrR 5406537..5407055 (+) 519 WP_025340908.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14576.82 Da        Isoelectric Point: 6.4772

>NTDB_id=1008734 ABNP31_RS24100 WP_003257770.1 5402660..5403061(-) (pilG) [Pseudomonas asiatica strain C-B8A]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAAQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1008734 ABNP31_RS24100 WP_003257770.1 5402660..5403061(-) (pilG) [Pseudomonas asiatica strain C-B8A]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCGCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCCAGCATCATCTTCG
TCGATGTGTTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCGGTGATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTCATTCTGCTGTCGTCACGTGACGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCACGTGCCCGGTTTTGCCGCAGCCCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632

Multiple sequence alignment