Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ABNP33_RS16590 Genome accession   NZ_CP157872
Coordinates   3502434..3504662 (+) Length   742 a.a.
NCBI ID   WP_262440071.1    Uniprot ID   -
Organism   Acinetobacter pittii strain bac73     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3497434..3509662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNP33_RS16565 (ABNP33_16560) lnt 3497884..3499443 (+) 1560 WP_086611609.1 apolipoprotein N-acyltransferase -
  ABNP33_RS16570 (ABNP33_16565) csaA 3499445..3499783 (-) 339 WP_005804172.1 tRNA-binding protein -
  ABNP33_RS16575 (ABNP33_16570) - 3499930..3500274 (-) 345 WP_002114661.1 hypothetical protein -
  ABNP33_RS16580 (ABNP33_16575) gspG 3500541..3501056 (-) 516 WP_019768050.1 type II secretion system major pseudopilin GspG -
  ABNP33_RS16585 (ABNP33_16580) gspF 3501080..3502285 (-) 1206 WP_262440072.1 type II secretion system inner membrane protein GspF -
  ABNP33_RS16590 (ABNP33_16585) priA 3502434..3504662 (+) 2229 WP_262440071.1 primosomal protein N' Machinery gene
  ABNP33_RS16595 (ABNP33_16590) kefB 3504739..3506583 (+) 1845 WP_032005112.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  ABNP33_RS16600 (ABNP33_16595) hslO 3506747..3507622 (+) 876 WP_262440070.1 Hsp33 family molecular chaperone HslO -
  ABNP33_RS16605 (ABNP33_16600) - 3507760..3508371 (+) 612 WP_262440069.1 LysE family translocator -
  ABNP33_RS16610 (ABNP33_16605) cbpA 3508518..3509474 (+) 957 WP_262440068.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84050.87 Da        Isoelectric Point: 8.5104

>NTDB_id=1008707 ABNP33_RS16590 WP_262440071.1 3502434..3504662(+) (priA) [Acinetobacter pittii strain bac73]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEQPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVQLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQSCPVILGSATPSIDSYYLVETGKLTSLQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKHTLVRKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKCLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGDIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=1008707 ABNP33_RS16590 WP_262440071.1 3502434..3504662(+) (priA) [Acinetobacter pittii strain bac73]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCATTTGGACGCCAAAATCTGA
TTGGCATCATTACTGAAAAAGTTGACCCAAGTGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GACGAACAGCCTATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCTGCCCAGTATTACCAATTTCCAATTGGCGA
GGTCATGCAAACCGCCCTACCCGCATTATTGCGTCAGGGCAAACCAATGGATGTTTTGTTCCATCTTTGGAAAATCACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGTTCTGTTAAGCAACAAGACGCGTATCAAATTTTAAAGTTACATCCTGCT
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACAGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCACACGACTTTAGTCCATCGCCTGTTCAATTGGCGCAAATGCCGCTTACACTCAATGAAGACCAAA
AGAAAGCAACCCAGCACGTCGTAAACGCACAGCATCAATACCAAGCTTTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCAAGGTAAGCAAGTACTGGTGTTAGTCCCTGAAATTGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAATCACGTTTTAACTGTGATATTGCTCTATTACACTCGGGCTTAAATGACTCCA
AACGCTTGCAGGCATGGCAACAGGCCCAGACTGGCAAAGCATCTATTATTTTAGGAACCCGCTCAGCCATCTATACGCCA
CTGCCACGTTTGGGCCTCATCATTTTAGATGAGGAGCATGACCTCTCTTATAAACAGCAAGAAGGTTTCCGTTACCATGC
ACGTGATGTCGCACTGTACCGAGGTCACTTACAAAGCTGCCCTGTTATTTTAGGTTCAGCAACACCGAGCATCGATAGTT
ATTATTTGGTCGAAACTGGTAAATTAACTTCACTGCAACTTAACCAACGTGCAGGCCATGCGCTTTTGCCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAGCAACATGGAATTAGCCAACCTCTTATTGAGCAAATCAAGCATACGTTAGTAAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTCTGTGAAAGTTGTGGGTGGCAAGCAA
ATTGTCCACATTGTGATGCACATTTTACGTTGCACACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGTACTGTT
CATCGCTTACCCGATCACTGCCCTGAATGCCAGCAAAAATGCCTAAAAACCCTAGGTGCTGGAACAGCTAAGGTTGAAGA
GCACTTACAAGAACTATTTCCAGACTATGATGTGATTCGGGTTGACCGTGACAGTACCAGTCGTGTCGGTAGCTGGCAAA
AAATTTATGACCGTATTCATCAAAACAAACCAACAATTTTGCTTGGCACTCAAATGCTGGCAAAAGGTCATCATTTCCCA
CACGTGACTTTGGTTGCCATTTTAGATATTGATGCGGGGTTACTTAGTGTCGACATCCGCGCGCCAGAACGTACTGCGCA
ATTAATTGTACAAGTCGCTGGTCGTGCAGGCCGTGGTGAACATAAAGGCCATGTTTATTTACAGACCTTAAGACCAGATC
ATCCATTACTCACCACACTCATCGAAAAAGATTATCGGGCGGTTGCCAAACAAACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCACCTTATCGTTATGCAGTACTGATACGTGCAGAGTCCAAAGATCGTGACTATACCTTACATTTCTTAAATGAAGC
GGCGGAACAATTACGCCAAATTGCAGGTGACATTGTTGATATTTGGGGACCAATTCCAGCCCCTATGGAGCGTAAAGCAG
GACGCTACCGCGCCCACATGGTGATTTTATCTGCCGACCGTGCTCGCCTCCATTTTTACTTAAGACAATGGTGGTCACAA
TTGGTTCATGCACCAAGGCAGCATCAACTTAGGCTATCAATTGATGTTGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

98.113

100

0.981

Multiple sequence alignment