Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ABNP33_RS03300 Genome accession   NZ_CP157872
Coordinates   668755..673260 (+) Length   1501 a.a.
NCBI ID   WP_262440469.1    Uniprot ID   -
Organism   Acinetobacter pittii strain bac73     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 663755..678260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNP33_RS03275 (ABNP33_03275) - 664198..664836 (-) 639 WP_262728204.1 hypothetical protein -
  ABNP33_RS03280 (ABNP33_03280) pilG 665121..665504 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  ABNP33_RS03285 (ABNP33_03285) pilH 665527..665889 (+) 363 WP_002116220.1 response regulator -
  ABNP33_RS03290 (ABNP33_03290) pilI 665950..666486 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  ABNP33_RS03295 (ABNP33_03295) pilJ 666529..668607 (+) 2079 WP_032036912.1 methyl-accepting chemotaxis protein -
  ABNP33_RS03300 (ABNP33_03300) chpA 668755..673260 (+) 4506 WP_262440469.1 hybrid sensor histidine kinase/response regulator Regulator
  ABNP33_RS03305 (ABNP33_03305) - 673260..673727 (+) 468 WP_017400243.1 hypothetical protein -
  ABNP33_RS03310 (ABNP33_03310) dapE 673770..674906 (-) 1137 WP_005072799.1 succinyl-diaminopimelate desuccinylase -
  ABNP33_RS03315 (ABNP33_03315) - 675033..675176 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  ABNP33_RS03320 (ABNP33_03320) - 675300..676181 (-) 882 WP_014207554.1 DUF1853 family protein -
  ABNP33_RS03325 (ABNP33_03325) - 676285..676653 (+) 369 WP_174725434.1 YbaN family protein -
  ABNP33_RS03330 (ABNP33_03330) elsL 676866..677369 (+) 504 WP_002116462.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171268.63 Da        Isoelectric Point: 4.4082

>NTDB_id=1008690 ABNP33_RS03300 WP_262440469.1 668755..673260(+) (chpA) [Acinetobacter pittii strain bac73]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIHEWMQSENVATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPNIQQYVQLVFKFYFFKLVDDFKSKKNHTLDFRPLILLGQQLQQQQSIEPALDELLLLS
DILTAETQTGLETNDLEPESTEVLTILTPEVAIETEQTLAETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFEASTKVEHLFKILLQEELSSHSEEVSLLRDYRQFIRNSLDLLATHCSTEQLEADLQKFNQIWDAYM
EQHGEHSSPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLDELKLYTQYIPNLNSESLETHQDVFEPLLNA
EVEQTANDPLIENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNLWVNDQENFAALNNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIQKQLVASSALIDFIRVVQDDLADRLQIVREQHLDYAASHTIQALKN
AGQVFDSQIKESKTEPETYVIPELNFEVLQQEAINNTELNLSELTSGSEQIAKSNNQLVEQTELQVLYADHDHTESIPDQ
DINSVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGTEPPPMMGEWE
QAQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAQKPETGRIELNIHRQGTDVVVTF
KDDGQGIDIEKVRQKALMSGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSAQEFFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHK
SLNETIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLHNIDALFMTVEGGLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=1008690 ABNP33_RS03300 WP_262440469.1 668755..673260(+) (chpA) [Acinetobacter pittii strain bac73]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGACGATGAATTTCT
TGAAATATTTGTTGAAGAAATTGAAGAAATTTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTGAAAATG
TTGCTACGCTTACTGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCAGGGCGAATGATTGGTGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGGTAATCAATCAGAGTCTCGGATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAAATCATACCCTAGACTTTA
GGCCCCTCATTTTATTGGGACAACAATTACAGCAACAGCAAAGTATAGAACCCGCGTTAGACGAACTTTTATTATTATCA
GATATTCTTACTGCTGAAACTCAAACTGGTTTAGAAACAAATGACTTAGAACCAGAATCTACAGAAGTTTTAACTATTTT
GACTCCAGAAGTTGCTATAGAAACTGAACAGACTCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTTTAATACGTGCGTTACATACA
TTACGTGGCAGCTCTGCCATGGCTCATGTAGAACCAATCTTTGAAGCCAGTACCAAAGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCATTCAGAAGAAGTTTCATTACTCCGTGATTATCGTCAGTTTATTCGAAATAGTTTGG
ATCTATTGGCTACCCATTGTTCTACTGAGCAATTGGAAGCTGATCTACAGAAATTTAATCAGATTTGGGATGCTTATATG
GAGCAGCATGGTGAGCATTCAAGCCCGCTCATGCCTCCACATGGTTTAGTGTCTCAGCTATTACAACTAGATGTTGCTGA
ATTACTTGATGCGGAATTAGACTTTGAGAAGGGAATACGTACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACATACTCAGTCGCAGGCAATGATTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGATTTATTGCAATCAGACTATGTTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAACTATTTGATGCCTTAGCTGCGGGGCAAAGAGTAAGTATTATTGAGCAACACCAAAATGTCTTGGACGAGCTAAAAC
TATATACTCAATATATTCCAAATCTTAATTCTGAATCATTAGAAACTCATCAAGACGTTTTTGAACCATTGCTTAATGCT
GAAGTTGAACAAACAGCGAATGATCCTCTGATAGAAAATGTATTCACTGATCAGGTCACCATAGGGCAGAGTGTACAACT
AGATCGACAATTCATTTCATCTGAGCATGTAAACCGTCATTTTGATCCAGATCTTTTAGATATTTTTCTTGAAGAAGCCG
ATGAGTTGCTTGAGGGAATGGATACAGATCTTAATCTTTGGGTTAATGATCAAGAAAACTTTGCCGCTCTCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATACAAAAACAGTTGGTAGCTTCGTCTGCTCTCATTGATTTTATTCGAGTAGTTCAAGATG
ACTTGGCTGACCGTCTTCAAATAGTACGTGAGCAGCATCTAGATTATGCTGCTTCTCATACTATTCAAGCACTTAAAAAT
GCAGGTCAGGTATTTGATTCTCAGATTAAAGAGAGCAAAACAGAACCTGAAACGTATGTTATACCTGAATTAAATTTTGA
AGTATTACAACAAGAAGCGATAAATAATACGGAGTTAAACCTCAGTGAGTTAACTTCTGGTTCTGAGCAGATTGCTAAGT
CTAATAATCAACTTGTTGAGCAAACCGAATTACAAGTTCTTTATGCTGATCACGATCATACAGAGAGTATCCCAGATCAG
GATATTAACTCTGTTGTCGAGCAGACATTCATGGAGGAAGCGGCCGAACTATTAGAAATGGCCGATCACTTATTAAAACA
ATGGTTCGAGCAACGTACTAACCGTAGTATCTTGCTTCAACTACAAAGGGCAGTGCACAGCTTGAAAGGCGGTTCCCGTA
TGCTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAACTTGAGAATGCTTTTGAACAATTTGCGCTTCATCATTTCAGC
TCAAATATTTATGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGTCTGGAAAATATCCAGTTCATTGAAACAGCAATTCAAATTCCTAGTAAGTTAACTAGAACTG
ATCTATTCAGCACGGAACCTGTAATGAGTTTTGTGCAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGAGTGGGAA
CAAGCACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
TGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGCGAATTGGAAACCCAAATTATTGCAAAACACGGTATTGAGAAC
TCGCGTTATACGGAATTTGATCCGTTAGAGATGGACCAATATTCTTCATTAAATCAGTTATCAAAGTCTCTTGCCGAGTC
TGCATCGGATTTAGTAGATTTTAAAAATACATTATCTGAAAAGATCAGGGACACTGAAGGTTTATTGGTACAGCAATCGC
GTATTCAGGCTGAAATTCAAGAAGGTCTTATGCGAACACGCTTAGTACCATTTTCTCGATTGTTGCCTCGTCTCCAAAGA
ATTGTGAGACAGACTTCTACCGCGTTAAATCGACCAGCAGAGCTTTTTGTTAATAATACTGAAGGTGAGCTAGACCGGAC
AATGCTAGAACGTTTGGTTACACCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGACTAGAAGACCGTGCGCAAC
GTGAGCAAGCGCAGAAACCAGAAACGGGACGTATTGAACTCAATATTCATCGTCAAGGTACAGATGTTGTAGTTACATTT
AAGGACGATGGACAAGGTATTGATATCGAGAAGGTTCGTCAAAAGGCGTTAATGTCTGGTTTGATTAATCCAGAGCAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGTACAGCTGATCAAGTCACTCAGATTTCAGGTC
GTGGCGTCGGACTGGATGTCGTGCAAAGTGATATTAAGGCTTTAGGTGGCCATGTGAGTGTCGACTCTGTATATGGGCAG
GGAACTGTCTTTACCATACGTGTTCCAACGACAGTAGCTGTTAGTGATGCTTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATCCCACTGGCTCAGATTGATCGAATTGTACGAGTTTCACCAGCATCATTAGAACAATATTTCGGAAGTGCACAAG
AGTTCTTTGAATTTGAAAATAAGCGCTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCCATTCCGCGCTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGACAAACCGTCGCATTATTAGTTGACCAACT
GATTGGCTCACGTGCACAGATTGTAGTTAAGCCAATAGGACAACAATTCTCTAGCATTGGTGCGATTGCAGGAGCAACTA
TTTTAGGTGATGGTCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAATCTACTCGCCGACATAAA
TCGCTTAATGAAACTATCTATAGACAACGCGAGTCTGACGAGCGACGTCTTATCATGATTGTAGATGACTCGGTAACTGT
ACGTAAGGTGACGTCTCGATTACTTGAACGTCAGGGCTATGATGTAGTCACGGCTAAAGATGGGGTTGACGCCATTGAGC
AATTGGAAAATATTAAACCAGATCTCATGTTACTTGATATTGAAATGCCGCGAATGGATGGCTTTGAGGTACTTAACCTC
GTTCGACACCATGATCTACATCAAGATATGCCAGTGATTATGATTACATCACGAACTGGTGAAAAACACCGTGAACGAGC
ATTTACTTTAGGTGTTAATCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCGTTATTCA
TGACAGTTGAAGGGGGACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

80.199

100

0.804


Multiple sequence alignment