Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ABNP33_RS02345 Genome accession   NZ_CP157872
Coordinates   473551..474435 (+) Length   294 a.a.
NCBI ID   WP_262728734.1    Uniprot ID   -
Organism   Acinetobacter pittii strain bac73     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 468551..479435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNP33_RS02320 (ABNP33_02320) - 468865..470112 (-) 1248 WP_002119535.1 YihY family inner membrane protein -
  ABNP33_RS02325 (ABNP33_02325) wrbA 470473..471075 (+) 603 WP_171518721.1 NAD(P)H:quinone oxidoreductase -
  ABNP33_RS02330 (ABNP33_02330) xpt 471127..471702 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  ABNP33_RS02335 (ABNP33_02335) - 471775..472488 (-) 714 WP_002119525.1 DUF3108 domain-containing protein -
  ABNP33_RS02340 (ABNP33_02340) - 472647..473318 (-) 672 WP_349914065.1 hypothetical protein -
  ABNP33_RS02345 (ABNP33_02345) tonB2 473551..474435 (+) 885 WP_262728734.1 energy transducer TonB Machinery gene
  ABNP33_RS02350 (ABNP33_02350) ybeY 474487..474963 (-) 477 WP_002119528.1 rRNA maturation RNase YbeY -
  ABNP33_RS02355 (ABNP33_02355) phoL 474973..476061 (-) 1089 WP_002119513.1 PhoH family protein -
  ABNP33_RS02360 (ABNP33_02360) miaB 476099..477550 (-) 1452 WP_002119558.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33587.12 Da        Isoelectric Point: 7.2040

>NTDB_id=1008688 ABNP33_RS02345 WP_262728734.1 473551..474435(+) (tonB2) [Acinetobacter pittii strain bac73]
MLNKRSLSIEPFHHWWQDRVFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRPSNEPVVQADFLAQADQQGSGA
FREVHRTSSDTPNPMPNDASTGDTELESLQKIQQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=1008688 ABNP33_RS02345 WP_262728734.1 473551..474435(+) (tonB2) [Acinetobacter pittii strain bac73]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATCATTGGTGGCAAGACCGGGTCTTTATTGCTGCAACAATATT
GGCAATCTTACTGCATATTTTTGTATTGCTCATTCACTTTGCCATGCCTAGCCCCTCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAACCAGTTGTTCAGGCAGATTTTTTAGCGCAAGCAGATCAGCAAGGTTCGGGCGCA
TTTCGAGAAGTTCACCGGACTTCTAGTGATACTCCAAATCCGATGCCTAATGATGCTTCAACTGGAGATACTGAGTTAGA
AAGTTTGCAAAAGATTCAGCAGCAAAGAGAACTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGCGGATGCAAGCCAAAGAAAAAAAGAACTAGAACAATTACAAAGTCAATTTCAAGCAAAAGCTGCGATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGCCAACAAGATTTCAGCCGTCAGCAAAAGATAAAAACAGTAGATGGTATTCAAGCAAA
GAAAGATGCTTCGGCTGCTTATTTGGATAAGTTCCGTGAAAAAGTAGAGCTTTATGGCAACCGCTATTACCCTGAAGAAG
CCAAACAGCAACAGCTAAGAGGTGAAGTGCGTTTAATGGTTATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGCTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCGAAGTCTTCAGTACGCCGCGGCGCACCATTTGGGCATTTTGA
TGCCAATATGAAAGATATTTCGGAGTTGCGTATTGTACGTACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

89.456

100

0.895

Multiple sequence alignment