Detailed information NTG1008635

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H1C95_RS00195
• Genome accession: NZ_LR778153
• Coordinates: 49776..50801 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate SC480
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 44776..55801

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1C95_RS00175	metJ	45837..46154 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
H1C95_RS00180	yiiX	46338..46946 (+)	609	WP_053884370.1	YiiX family permuted papain-like enzyme	-
H1C95_RS00185	rpmE	47007..47219 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H1C95_RS00190	priA	47422..49620 (+)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
H1C95_RS00195	cytR	49776..50801 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
H1C95_RS00200	ftsN	50893..51852 (+)	960	WP_000068828.1	cell division protein FtsN	-
H1C95_RS00205	hslV	51945..52475 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H1C95_RS00210	hslU	52485..53816 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
H1C95_RS00215	menA	53883..54809 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H1C95_RS00220	rraA	54902..55387 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H1C95_RS00225	zapB	55472..55717 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1008635 H1C95_RS00195 WP_000644904.1 49776..50801(+) (cytR) [Escherichia coli isolate SC480]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1008635 H1C95_RS00195 WP_000644904.1 49776..50801(+) (cytR) [Escherichia coli isolate SC480]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCAGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATTGATTTGATCATCACCAAACAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628