Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABNP42_RS03855 Genome accession   NZ_CP157868
Coordinates   740578..740769 (+) Length   63 a.a.
NCBI ID   WP_179289286.1    Uniprot ID   -
Organism   Priestia flexa strain Antcr29     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 735578..745769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNP42_RS03835 (ABNP42_03835) - 736323..738317 (+) 1995 WP_131887357.1 beta-galactosidase -
  ABNP42_RS03840 (ABNP42_03840) - 738348..738536 (-) 189 WP_094912834.1 YjzD family protein -
  ABNP42_RS03845 (ABNP42_03845) - 738784..739521 (+) 738 WP_094912833.1 alpha/beta hydrolase -
  ABNP42_RS03850 (ABNP42_03850) - 739564..740463 (+) 900 WP_256993398.1 NAD(P)-dependent oxidoreductase -
  ABNP42_RS03855 (ABNP42_03855) comZ 740578..740769 (+) 192 WP_179289286.1 ComZ family protein Regulator
  ABNP42_RS03860 (ABNP42_03860) - 740787..740978 (-) 192 WP_094912832.1 hypothetical protein -
  ABNP42_RS03865 (ABNP42_03865) - 741255..742193 (+) 939 WP_210610962.1 beta-ketoacyl-ACP synthase III -
  ABNP42_RS03870 (ABNP42_03870) fabF 742228..743469 (+) 1242 WP_350019821.1 beta-ketoacyl-ACP synthase II -
  ABNP42_RS03875 (ABNP42_03875) - 743516..743626 (-) 111 Protein_675 hypothetical protein -
  ABNP42_RS03880 (ABNP42_03880) - 743800..744570 (+) 771 WP_131887354.1 DUF2268 domain-containing putative Zn-dependent protease -
  ABNP42_RS03885 (ABNP42_03885) - 744766..745515 (+) 750 WP_094913054.1 YjbA family protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7284.43 Da        Isoelectric Point: 4.2259

>NTDB_id=1008560 ABNP42_RS03855 WP_179289286.1 740578..740769(+) (comZ) [Priestia flexa strain Antcr29]
MEQQMQFMQIAMKYLPEAKEILDQTGVELSMEHVQPVLGLLTKVMNDAYELGKEDALKEQNEK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1008560 ABNP42_RS03855 WP_179289286.1 740578..740769(+) (comZ) [Priestia flexa strain Antcr29]
ATGGAACAACAAATGCAGTTTATGCAAATCGCAATGAAGTATTTACCAGAAGCAAAAGAGATTTTAGATCAAACAGGCGT
AGAACTATCTATGGAGCACGTTCAACCAGTTCTGGGGCTTCTAACAAAAGTAATGAACGATGCTTATGAACTTGGTAAAG
AAGACGCGTTAAAAGAACAGAATGAAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(2-56)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

62.069

92.063

0.571

Multiple sequence alignment