Detailed information NTG1008528

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: QCC38_RS08860
• Genome accession: NZ_CP157866
• Coordinates: 1851832..1852533 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain SCCH68:Ab991128
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1846832..1857533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QCC38_RS08825 (QCC38_008825)	kdsB	1847355..1848116 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
QCC38_RS08830 (QCC38_008830)	-	1848128..1849108 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
QCC38_RS08835 (QCC38_008835)	-	1849120..1849461 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
QCC38_RS08840 (QCC38_008840)	-	1849479..1850252 (+)	774	WP_000497298.1	TatD family hydrolase	-
QCC38_RS08845 (QCC38_008845)	-	1850290..1850898 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
QCC38_RS08850 (QCC38_008850)	-	1850908..1851462 (+)	555	WP_000841373.1	type II secretion system protein	-
QCC38_RS08855 (QCC38_008855)	xcpV	1851452..1851832 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
QCC38_RS08860 (QCC38_008860)	xcpW	1851832..1852533 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
QCC38_RS08865 (QCC38_008865)	gspK	1852533..1853492 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
QCC38_RS08870 (QCC38_008870)	-	1853723..1854319 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
QCC38_RS08875 (QCC38_008875)	ung	1854370..1855083 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
QCC38_RS08880 (QCC38_008880)	-	1855080..1856204 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
QCC38_RS08885 (QCC38_008885)	tadA	1856211..1856714 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
QCC38_RS08890 (QCC38_008890)	-	1856784..1857227 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1008528 QCC38_RS08860 WP_000594589.1 1851832..1852533(+) (xcpW) [Acinetobacter baumannii strain SCCH68:Ab991128]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1008528 QCC38_RS08860 WP_000594589.1 1851832..1852533(+) (xcpW) [Acinetobacter baumannii strain SCCH68:Ab991128]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996