Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   ABM478_RS06000 Genome accession   NZ_CP157848
Coordinates   1159885..1160568 (+) Length   227 a.a.
NCBI ID   WP_000350713.1    Uniprot ID   A0A9W5RA28
Organism   Bacillus cereus strain B9     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1154885..1165568
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABM478_RS05980 - 1155946..1157592 (+) 1647 WP_000728609.1 peptide ABC transporter substrate-binding protein -
  ABM478_RS05985 - 1157623..1157826 (-) 204 WP_000559971.1 hypothetical protein -
  ABM478_RS05990 spx 1158420..1158815 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  ABM478_RS05995 - 1158865..1159539 (-) 675 WP_000362607.1 TerC family protein -
  ABM478_RS06000 mecA 1159885..1160568 (+) 684 WP_000350713.1 adaptor protein MecA Regulator
  ABM478_RS06005 - 1160641..1162185 (+) 1545 WP_000799194.1 cardiolipin synthase -
  ABM478_RS06010 - 1162266..1163510 (+) 1245 WP_000628316.1 competence protein CoiA family protein -
  ABM478_RS06015 pepF 1163562..1165388 (+) 1827 WP_000003348.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27010.06 Da        Isoelectric Point: 3.9822

>NTDB_id=1008469 ABM478_RS06000 WP_000350713.1 1159885..1160568(+) (mecA) [Bacillus cereus strain B9]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=1008469 ABM478_RS06000 WP_000350713.1 1159885..1160568(+) (mecA) [Bacillus cereus strain B9]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment