Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   UXQ72_RS10205 Genome accession   NZ_CP157769
Coordinates   2036887..2037603 (+) Length   238 a.a.
NCBI ID   WP_061745082.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN118     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2031887..2042603
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXQ72_RS10175 (UXQ72_010175) - 2032103..2032729 (+) 627 WP_000522375.1 nitroreductase family protein -
  UXQ72_RS10180 (UXQ72_010180) - 2033090..2033875 (+) 786 WP_000867944.1 carbon-nitrogen family hydrolase -
  UXQ72_RS10185 (UXQ72_010185) - 2034476..2034610 (-) 135 WP_001549197.1 delta-lysin family phenol-soluble modulin -
  UXQ72_RS10190 (UXQ72_010190) agrB 2034845..2035414 (+) 570 WP_001105708.1 accessory gene regulator AgrB -
  UXQ72_RS10195 (UXQ72_010195) agrD 2035411..2035551 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  UXQ72_RS10200 (UXQ72_010200) agrC 2035576..2036868 (+) 1293 WP_001657119.1 quorum-sensing sensor histidine kinase AgrC -
  UXQ72_RS10205 (UXQ72_010205) agrA 2036887..2037603 (+) 717 WP_061745082.1 LytTR family DNA-binding domain-containing protein Regulator
  UXQ72_RS10210 (UXQ72_010210) - 2037675..2037782 (+) 108 WP_031785433.1 hypothetical protein -
  UXQ72_RS10215 (UXQ72_010215) - 2037972..2038931 (-) 960 WP_001253295.1 carbohydrate kinase -
  UXQ72_RS10220 (UXQ72_010220) - 2038928..2040412 (-) 1485 WP_000141419.1 sucrose-6-phosphate hydrolase -
  UXQ72_RS10225 (UXQ72_010225) - 2040561..2041511 (-) 951 WP_000790314.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27963.94 Da        Isoelectric Point: 5.8625

>NTDB_id=1008193 UXQ72_RS10205 WP_061745082.1 2036887..2037603(+) (agrA) [Staphylococcus aureus strain BSN118]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIDCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=1008193 UXQ72_RS10205 WP_061745082.1 2036887..2037603(+) (agrA) [Staphylococcus aureus strain BSN118]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATCAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
ACTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAGGATGATCCAGCAGAATTAAGAACACGTATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCTGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACTAAGTCACACAGACTCATTGCGCATTTAGACAATCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGCTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATTG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-237)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

99.58

100

0.996

Multiple sequence alignment