Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AAN986_RS23350 Genome accession   NZ_CP157763
Coordinates   5175398..5175796 (-) Length   132 a.a.
NCBI ID   WP_016447937.1    Uniprot ID   A0AAX3SQK3
Organism   Delftia sp. DS1230     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5170398..5180796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAN986_RS23335 - 5172219..5174471 (-) 2253 WP_016447934.1 methyl-accepting chemotaxis protein -
  AAN986_RS23340 - 5174490..5175017 (-) 528 WP_016447935.1 chemotaxis protein CheW -
  AAN986_RS23345 - 5175033..5175398 (-) 366 WP_016447936.1 response regulator -
  AAN986_RS23350 pilG 5175398..5175796 (-) 399 WP_016447937.1 response regulator Regulator
  AAN986_RS23355 - 5175844..5175996 (-) 153 WP_017406135.1 rubredoxin -
  AAN986_RS23360 - 5176112..5177071 (+) 960 WP_016453190.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  AAN986_RS23365 hemL 5177164..5178462 (+) 1299 WP_016453189.1 glutamate-1-semialdehyde 2,1-aminomutase -
  AAN986_RS23370 - 5178513..5179112 (-) 600 WP_046987385.1 DNA-3-methyladenine glycosylase I -
  AAN986_RS23375 - 5179115..5179591 (-) 477 WP_047217484.1 c-type cytochrome -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14600.85 Da        Isoelectric Point: 6.9242

>NTDB_id=1008151 AAN986_RS23350 WP_016447937.1 5175398..5175796(-) (pilG) [Delftia sp. DS1230]
MTTSGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
DTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVEQFGKQTIGAL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1008151 AAN986_RS23350 WP_016447937.1 5175398..5175796(-) (pilG) [Delftia sp. DS1230]
GTGACGACATCGGGCGCACCCTTGCGCGTACTCGTGGTGGATGACAGCAATACCATCCGCCGCAGCGCAGAAATCTTCCT
CAAGCAGGGCGGGCACGAAGTGCTCCTGGCCGACGACGGCTTCGACGCACTGTCCAAGGTCAACGACTACCAGCCCCAGC
TGATCTTCTGCGACATCCTCATGCCCAAGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCGCGCTTTGCT
GACACGCCTGTGGTCATGCTCTCGTCCAAGGACGGCGTATTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCAGGACTA
CCTCACGAAACCCTTCACCAAAGACCAGCTGCTGCAGGCCGTGGAGCAGTTCGGCAAGCAAACCATAGGAGCACTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.772

86.364

0.508

Multiple sequence alignment