Detailed information NTG1008150

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AAN986_RS22770
• Genome accession: NZ_CP157763
• Coordinates: 5043710..5044930 (+)
• Length: 406 a.a.
• NCBI ID: WP_047217967.1
• Uniprot ID: -
• Organism: Delftia sp. DS1230
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5038710..5049930

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAN986_RS22750	coaD	5039480..5039980 (-)	501	WP_016449072.1	pantetheine-phosphate adenylyltransferase	-
AAN986_RS22755	rsmD	5040111..5040818 (-)	708	WP_047217965.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AAN986_RS22760	-	5040815..5042176 (-)	1362	WP_016454147.1	pitrilysin family protein	-
AAN986_RS22765	-	5042203..5043681 (-)	1479	WP_047217966.1	pitrilysin family protein	-
AAN986_RS22770	pilA	5043710..5044930 (+)	1221	WP_047217967.1	signal recognition particle-docking protein FtsY	Machinery gene
AAN986_RS22775	-	5045863..5046600 (+)	738	WP_241150346.1	GntR family transcriptional regulator	-
AAN986_RS22780	-	5047124..5048053 (+)	930	WP_016454141.1	DMT family transporter	-
AAN986_RS22785	-	5048377..5049366 (+)	990	WP_047217968.1	tripartite tricarboxylate transporter substrate binding protein	-
AAN986_RS22790	cutA	5049353..5049751 (-)	399	WP_013803939.1	divalent-cation tolerance protein CutA	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42479.32 Da
• Isoelectric Point: 5.5266

>NTDB_id=1008150 AAN986_RS22770 WP_047217967.1 5043710..5044930(+) (pilA) [Delftia sp. DS1230]
MFSFFKKKPTPSSAEISPADSSAAPEEAGIPATPPQDRAPDLPPGTPAPQAAADTGSAWWRKPFGGGKGDAAPPAAPAAP
TAAASTLAPADFIAAPEPTAKPEAEGASRQNWMQRLKAGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLTDLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLIIGEHQPTVVMVAGVNGAGKTTSIGKLTKHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVTKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=1008150 AAN986_RS22770 WP_047217967.1 5043710..5044930(+) (pilA) [Delftia sp. DS1230]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCTCCGCCGAGATTTCCCCGGCGGACAGCAGCGCCGCGCCTGAAGA
GGCCGGCATTCCCGCAACCCCGCCGCAGGACCGCGCCCCAGACCTGCCCCCTGGCACGCCTGCCCCACAGGCCGCAGCCG
ACACCGGCAGCGCCTGGTGGCGCAAGCCCTTCGGCGGCGGCAAGGGCGATGCCGCCCCGCCTGCCGCACCCGCTGCACCC
ACTGCTGCTGCTTCCACGCTCGCGCCTGCCGACTTCATTGCCGCACCCGAGCCCACGGCCAAGCCCGAAGCCGAAGGCGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGGCCGGACTGCGCAAGACCGGCAGCAGCATCGCCACGGTCTTCACCGGCA
CGCAGATCAACGATGCGCTGTACGAAGAGCTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCACCGACCTGCGCCGCCGCGTCAAGGAAGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGTTGCTGGCCGATGC
ACTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGATCATCGGCGAGCACCAGCCTACCGTGGTCATGGTCGCTGGCG
TCAACGGCGCAGGCAAGACCACCTCCATCGGCAAGCTGACCAAGCATCTGGCCGACGAAGGCCAGAGCGTGCTGCTGGCT
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGCGGTGATCCTGCAGCCGTGAGCTTTGATGCCGTCACCGCCGGCCGCGCCCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCACCAAGGCCGAT
GCCACGGCACCGCACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTTGA
CGATGCACTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAAGACCTGGAGACCTTCAACGCCAGGGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.227	100	0.502