Detailed information NTG1008010

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ABL163_RS16775
• Genome accession: NZ_CP157671
• Coordinates: 3395088..3396251 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain TZ01
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3390088..3401251

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABL163_RS16745	-	3390352..3390771 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
ABL163_RS16750	comFC	3390845..3391534 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
ABL163_RS16755	-	3391540..3391824 (-)	285	WP_003151389.1	competence protein ComFB	-
ABL163_RS16760	comFA	3391882..3393267 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
ABL163_RS16765	-	3393376..3394224 (-)	849	WP_032876160.1	DegV family protein	-
ABL163_RS16770	degU	3394322..3395011 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ABL163_RS16775	degS	3395088..3396251 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
ABL163_RS16780	-	3396474..3397121 (+)	648	WP_007614107.1	YigZ family protein	-
ABL163_RS16785	-	3397126..3398307 (+)	1182	WP_032876157.1	LCP family protein	-
ABL163_RS16790	-	3398406..3399482 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
ABL163_RS16795	-	3399615..3400811 (-)	1197	WP_032876154.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1008010 ABL163_RS16775 WP_007407484.1 3395088..3396251(-) (degS) [Bacillus velezensis strain TZ01]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1008010 ABL163_RS16775 WP_007407484.1 3395088..3396251(-) (degS) [Bacillus velezensis strain TZ01]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951