Detailed information NTG1007731

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ABL847_RS26530
• Genome accession: NZ_CP157616
• Coordinates: 5701308..5702570 (-)
• Length: 420 a.a.
• NCBI ID: WP_418127665.1
• Uniprot ID: -
• Organism: Variovorax sp. KK3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5696308..5707570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABL847_RS26505 (ABL847_26460)	-	5696890..5698074 (+)	1185	WP_077002107.1	COX15/CtaA family protein	-
ABL847_RS26510 (ABL847_26465)	cyoE	5698071..5698994 (+)	924	WP_077002106.1	heme o synthase	-
ABL847_RS26515 (ABL847_26470)	-	5699003..5699611 (+)	609	WP_179107031.1	SCO family protein	-
ABL847_RS26520 (ABL847_26475)	rpoH	5699693..5700628 (-)	936	WP_077002104.1	RNA polymerase sigma factor RpoH	-
ABL847_RS26525 (ABL847_26480)	-	5700794..5701255 (-)	462	WP_077002103.1	DUF962 domain-containing protein	-
ABL847_RS26530 (ABL847_26485)	pilA	5701308..5702570 (-)	1263	WP_418127665.1	signal recognition particle-docking protein FtsY	Machinery gene
ABL847_RS26535 (ABL847_26490)	-	5702600..5704057 (+)	1458	WP_077003486.1	M16 family metallopeptidase	-
ABL847_RS26540 (ABL847_26495)	-	5704072..5705412 (+)	1341	WP_077003487.1	M16 family metallopeptidase	-
ABL847_RS26545 (ABL847_26500)	-	5705455..5706078 (+)	624	WP_077003485.1	RsmD family RNA methyltransferase	-
ABL847_RS26550 (ABL847_26505)	coaD	5706140..5706643 (+)	504	WP_077003484.1	pantetheine-phosphate adenylyltransferase	-
ABL847_RS26555 (ABL847_26510)	pxpB	5706640..5707296 (+)	657	WP_077003483.1	5-oxoprolinase subunit PxpB	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 43600.45 Da
• Isoelectric Point: 6.0015

>NTDB_id=1007731 ABL847_RS26530 WP_418127665.1 5701308..5702570(-) (pilA) [Variovorax sp. KK3]
MFSFFKKKPPAETPAPSPAASPAEAPVEPPAPARSVFSPSSWFGGKPAAAEPPPVAPPVTPPVAPVVAPPVVPPLAPPVE
PVAAPPVLPHVATPPPPPVAPPPPPAPIAHPVPASVEPPAPARSGWLGKLKAGLRKTGNGITAAFVNAQIDDELYEELEA
ALLMADTGVKATEYLLEDLRKRVRSNMATDASQVKVLLADAIADLLRPLEKALVIGEHTPTVIMVAGVNGAGKTTSIGKL
TRHLSGEGAAVLLAAADTFRAAAREQLLVWADRNTVEIVSQEGGDPAAVSFDAVNAGKARGKDVVLVDTAGRLPTQLHLM
DELKKIKRVVTRAEATAPHEILLVIDGNTGQNALAQVKSFDEALGLTGLVITKLDGTAKGGVLCAIARERPVPVYFIGVG
EKLEDLETFNAREFAQALMG

Nucleotide

• Length: 1263 bp

>NTDB_id=1007731 ABL847_RS26530 WP_418127665.1 5701308..5702570(-) (pilA) [Variovorax sp. KK3]
ATGTTCAGTTTCTTCAAGAAAAAACCCCCGGCCGAAACGCCAGCGCCAAGCCCAGCCGCCTCTCCGGCCGAGGCGCCCGT
GGAGCCGCCGGCGCCGGCCAGGTCGGTGTTTTCACCGTCGAGCTGGTTCGGCGGCAAGCCTGCTGCGGCAGAGCCGCCGC
CAGTTGCACCGCCGGTCACACCGCCCGTCGCGCCGGTTGTTGCACCCCCAGTCGTGCCGCCCCTGGCGCCGCCCGTCGAG
CCGGTTGCTGCGCCACCTGTCCTGCCGCACGTCGCCACGCCGCCCCCCCCGCCGGTTGCGCCGCCGCCCCCTCCAGCGCC
GATCGCTCATCCGGTCCCGGCGTCCGTCGAGCCGCCCGCGCCCGCACGTAGCGGCTGGCTGGGCAAGCTCAAGGCCGGCC
TGCGCAAGACCGGCAACGGCATCACCGCAGCCTTCGTCAACGCCCAGATCGACGACGAGCTCTACGAAGAACTCGAAGCT
GCGCTACTGATGGCCGACACCGGCGTCAAAGCCACCGAATACCTGCTGGAAGACTTGCGCAAGCGTGTGCGCAGCAACAT
GGCCACCGATGCCTCCCAAGTCAAGGTGCTGCTGGCCGACGCGATCGCCGACCTGCTGCGTCCGCTCGAGAAAGCACTCG
TCATCGGCGAGCACACGCCCACGGTGATCATGGTGGCGGGGGTCAACGGCGCCGGCAAGACCACCTCGATCGGCAAACTG
ACCCGGCACCTGTCCGGCGAGGGCGCTGCGGTACTGCTGGCGGCTGCGGACACCTTCCGGGCAGCGGCGCGCGAGCAACT
GCTGGTCTGGGCCGACCGCAACACGGTCGAGATCGTGAGCCAGGAAGGCGGCGACCCGGCCGCGGTGAGCTTCGATGCCG
TCAACGCCGGCAAGGCGCGCGGCAAGGACGTGGTGCTCGTCGACACTGCCGGCCGGCTGCCCACGCAGTTGCACCTGATG
GACGAACTCAAGAAGATCAAACGCGTCGTCACGCGGGCGGAGGCCACCGCGCCGCACGAGATCCTGCTCGTCATCGACGG
CAACACGGGCCAGAACGCGCTGGCCCAGGTCAAATCCTTCGACGAAGCGCTGGGGCTGACCGGGCTCGTCATCACCAAGC
TGGACGGCACGGCCAAGGGCGGGGTGCTGTGCGCGATCGCGCGCGAGCGTCCGGTGCCGGTCTATTTCATCGGCGTCGGC
GAGAAGCTGGAAGATCTGGAAACCTTCAACGCGCGCGAGTTCGCCCAGGCCTTGATGGGCTAG

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (138-201)

• SRP54-type protein, GTPase domain (SRP54) (220-419)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	47.209	100	0.483