Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABL847_RS14150 Genome accession   NZ_CP157616
Coordinates   3083245..3083643 (-) Length   132 a.a.
NCBI ID   WP_077000212.1    Uniprot ID   -
Organism   Variovorax sp. KK3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3078245..3088643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABL847_RS14135 (ABL847_14115) - 3079927..3082275 (-) 2349 WP_077000209.1 methyl-accepting chemotaxis protein -
  ABL847_RS14140 (ABL847_14120) - 3082316..3082846 (-) 531 WP_077000210.1 chemotaxis protein CheW -
  ABL847_RS14145 (ABL847_14125) - 3082880..3083245 (-) 366 WP_077000211.1 response regulator -
  ABL847_RS14150 (ABL847_14130) pilG 3083245..3083643 (-) 399 WP_077000212.1 response regulator Regulator
  ABL847_RS14155 (ABL847_14135) - 3083721..3083891 (-) 171 WP_007838397.1 rubredoxin -
  ABL847_RS14160 (ABL847_14140) thiD 3084003..3084968 (+) 966 WP_077000213.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  ABL847_RS14165 (ABL847_14145) hemL 3084990..3086273 (+) 1284 WP_077000214.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ABL847_RS14170 (ABL847_14150) - 3086284..3086790 (+) 507 WP_077000215.1 hypothetical protein -
  ABL847_RS14175 (ABL847_14155) purH 3086860..3088431 (-) 1572 WP_077000216.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14704.81 Da        Isoelectric Point: 7.3216

>NTDB_id=1007720 ABL847_RS14150 WP_077000212.1 3083245..3083643(-) (pilG) [Variovorax sp. KK3]
MSSNGSGYKVLVIDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALSKVNDHKPHLIFCDILMPRLDGYQTCAIIKRNSHFS
KVPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQAVEQFGTVSQEVQ

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1007720 ABL847_RS14150 WP_077000212.1 3083245..3083643(-) (pilG) [Variovorax sp. KK3]
ATGAGCTCGAATGGATCCGGTTACAAAGTGCTCGTCATCGACGACAGCAACACCATTCGGCGAAGCGCCGAGATCTTTCT
CAAGCAGGGTGGCCACGAGGTGCTGCTTGCCGAAGACGGGTTCGATGCGCTCTCCAAGGTCAACGACCACAAGCCGCACC
TCATCTTCTGCGACATCCTGATGCCGCGGCTCGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACTCGCACTTCTCC
AAGGTGCCGGTCGTGATGCTCTCTTCCAAGGACGGCGTGTTCGACAAAGCGCGCGGCCGCATGGTCGGCTCGCAGGACTA
CCTCACGAAACCCTTCACCAAAGACCAACTGCTGCAGGCTGTAGAGCAGTTCGGCACCGTCTCGCAGGAAGTGCAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

61.947

85.606

0.53

Multiple sequence alignment