Detailed information NTG1007692

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ABL840_RS33030
• Genome accession: NZ_CP157613
• Coordinates: 7048581..7049837 (+)
• Length: 418 a.a.
• NCBI ID: WP_093304228.1
• Uniprot ID: -
• Organism: Variovorax sp. NFACC27
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 7043581..7054837

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABL840_RS33010 (ABL840_32905)	-	7043943..7044581 (-)	639	WP_093206687.1	LysE/ArgO family amino acid transporter	-
ABL840_RS33015 (ABL840_32910)	-	7044660..7045574 (+)	915	WP_093206686.1	LysR family transcriptional regulator ArgP	-
ABL840_RS33020 (ABL840_32915)	-	7045706..7047085 (-)	1380	WP_093304226.1	M16 family metallopeptidase	-
ABL840_RS33025 (ABL840_32920)	-	7047100..7048551 (-)	1452	WP_371287212.1	M16 family metallopeptidase	-
ABL840_RS33030 (ABL840_32925)	pilA	7048581..7049837 (+)	1257	WP_093304228.1	signal recognition particle-docking protein FtsY	Machinery gene
ABL840_RS33035 (ABL840_32930)	-	7050067..7051863 (-)	1797	WP_418116093.1	ATP-binding protein	-
ABL840_RS33040 (ABL840_32935)	-	7051860..7052591 (-)	732	WP_093304232.1	response regulator transcription factor	-
ABL840_RS33045 (ABL840_32940)	-	7052777..7053241 (+)	465	WP_093304234.1	DUF962 domain-containing protein	-
ABL840_RS33050 (ABL840_32945)	rpoH	7053340..7054281 (+)	942	WP_093206681.1	RNA polymerase sigma factor RpoH	-

Sequence

Protein

• Length: 418 a.a.
• Molecular weight: 43338.02 Da
• Isoelectric Point: 5.5535

>NTDB_id=1007692 ABL840_RS33030 WP_093304228.1 7048581..7049837(+) (pilA) [Variovorax sp. NFACC27]
MFSFFKKKPPAETPDAPASTPPAPAAPAPEPAPARSVFSPSSWFGSKPTVEETPAPPPAPALAPVAAPAPAPVPSPAPAP
APAPVASPAPVPVSAPPVAAPVPAPAPVVAPIAEPVIATERKGWFDKLKTGLRKTGTGIQAVFVNAKIDEALYEELESAL
LMADTGVKATEYLLDDLRGRVKRQMATDASQVKALLAETVADLLRPLEKPLVIGQFTPTVIMVAGVNGAGKTTSIGKLTK
HLADEGASVLLAAADTFRAAAREQLLVWADRNTVEIVSQEGGDPSAVSFDAVNAGKARGKDVVLVDTAGRLPTQLHLMDE
LKKIKRVVTKADGTAPHEVLLVIDGNTGQNALAQVKAFDETLGLTGLVVTKLDGTAKGGVLCAIARERPIPVYFIGVGEK
LEDLETFNAREFAQALLG

Nucleotide

• Length: 1257 bp

>NTDB_id=1007692 ABL840_RS33030 WP_093304228.1 7048581..7049837(+) (pilA) [Variovorax sp. NFACC27]
ATGTTCAGTTTCTTCAAGAAAAAACCGCCTGCCGAAACCCCCGATGCGCCGGCGTCCACCCCGCCGGCCCCGGCGGCGCC
TGCCCCGGAGCCCGCGCCGGCGCGCTCGGTGTTCTCGCCTTCGAGCTGGTTCGGCTCGAAGCCGACGGTGGAAGAAACGC
CTGCCCCGCCACCCGCACCCGCTCTCGCACCCGTTGCAGCACCGGCACCGGCGCCAGTGCCTTCGCCAGCTCCTGCGCCG
GCCCCCGCACCGGTTGCATCGCCCGCTCCAGTCCCTGTTTCCGCTCCCCCGGTTGCCGCCCCCGTTCCGGCGCCAGCGCC
GGTCGTCGCTCCGATTGCCGAACCCGTCATCGCCACCGAGCGCAAGGGCTGGTTCGACAAGCTCAAGACCGGCCTGCGCA
AGACCGGCACCGGCATCCAGGCCGTGTTCGTCAACGCGAAGATCGACGAGGCACTGTACGAAGAACTCGAATCCGCCCTG
CTGATGGCCGACACCGGCGTGAAGGCGACCGAATACCTGCTCGACGACCTGCGCGGCCGGGTCAAGCGCCAGATGGCCAC
CGACGCCTCGCAAGTCAAGGCCCTGCTGGCCGAGACGGTGGCCGACCTGCTACGCCCGCTCGAGAAGCCGCTGGTCATCG
GCCAGTTCACGCCCACCGTGATCATGGTGGCCGGCGTCAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTCACCAAG
CACCTGGCCGACGAAGGCGCCTCGGTGCTGCTGGCCGCGGCCGACACCTTCCGCGCGGCGGCGCGCGAGCAGCTGCTGGT
CTGGGCCGACCGCAACACCGTGGAGATCGTGAGCCAGGAAGGCGGCGACCCGTCGGCCGTGAGCTTCGACGCGGTGAACG
CCGGCAAGGCGCGCGGCAAGGACGTGGTGCTGGTCGACACGGCCGGCCGCCTGCCGACGCAGCTGCACCTGATGGACGAG
CTGAAGAAGATCAAGCGCGTCGTCACCAAGGCCGACGGCACCGCGCCGCACGAGGTGCTGCTGGTGATCGACGGCAACAC
CGGCCAGAACGCCCTGGCGCAGGTCAAGGCCTTCGACGAGACGCTGGGCCTCACGGGCCTGGTCGTGACCAAGCTCGACG
GCACGGCCAAGGGCGGCGTGCTGTGCGCCATCGCGCGGGAAAGGCCGATTCCGGTCTATTTCATCGGCGTGGGCGAAAAG
CTGGAAGACCTGGAAACCTTCAACGCCCGCGAATTCGCGCAGGCACTGCTCGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (218-418)

• SRP54-type protein, helical bundle domain (SRP54_N) (136-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.821	100	0.495