Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | G3R43_RS28995 | Genome accession | NZ_LR739069 |
| Coordinates | 6190758..6191354 (-) | Length | 198 a.a. |
| NCBI ID | WP_003095839.1 | Uniprot ID | G3XD30 |
| Organism | Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6185758..6196354
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3R43_RS28975 (PERCYII40_5786) | aroK | 6186889..6187407 (-) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| G3R43_RS28980 (PERCYII40_5787) | pilQ | 6187419..6189563 (-) | 2145 | WP_162291230.1 | type 4a pilus secretin PilQ | Machinery gene |
| G3R43_RS28985 (PERCYII40_5788) | comL/pilP | 6189617..6190141 (-) | 525 | WP_003095836.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| G3R43_RS28990 (PERCYII40_5789) | pilO | 6190138..6190761 (-) | 624 | WP_003103268.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| G3R43_RS28995 (PERCYII40_5790) | pilN | 6190758..6191354 (-) | 597 | WP_003095839.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| G3R43_RS29000 (PERCYII40_5791) | pilM | 6191354..6192418 (-) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| G3R43_RS29005 (PERCYII40_5792) | - | 6192603..6195074 (+) | 2472 | WP_003125627.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 22213.55 Da Isoelectric Point: 10.0895
>NTDB_id=1007383 G3R43_RS28995 WP_003095839.1 6190758..6191354(-) (pilN) [Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40]
MARINLLPWREELREQRKQQFLVILGGVLVASAALVFLGDQYFTAAIENQNARNDFLRKEIVVLDARIKEISELKSRRQQ
LLERMKIIQDLQGNRPIIGRVFDQLVRTLPDGVYFTDLKMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKA
VTQGAVDQANVFQLTVQQTQPGEEDAKAKHGVAQGAKK
MARINLLPWREELREQRKQQFLVILGGVLVASAALVFLGDQYFTAAIENQNARNDFLRKEIVVLDARIKEISELKSRRQQ
LLERMKIIQDLQGNRPIIGRVFDQLVRTLPDGVYFTDLKMTGKNIAIAGAAESNNRVSNLMRNMDASEWLTAPTLNEVKA
VTQGAVDQANVFQLTVQQTQPGEEDAKAKHGVAQGAKK
Nucleotide
Download Length: 597 bp
>NTDB_id=1007383 G3R43_RS28995 WP_003095839.1 6190758..6191354(-) (pilN) [Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40]
ATGGCACGGATCAACCTTCTACCCTGGCGCGAAGAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATTCTTGGCGG
CGTCCTGGTGGCATCGGCTGCGCTGGTATTCCTTGGCGACCAGTACTTCACCGCGGCCATCGAGAACCAGAACGCCCGCA
ACGACTTCCTGCGCAAGGAAATCGTCGTACTCGACGCCCGGATCAAGGAAATCAGCGAACTGAAGTCGCGGCGCCAGCAA
TTGCTCGAGCGGATGAAGATCATCCAGGACCTGCAGGGCAACCGTCCCATCATCGGACGGGTGTTCGACCAGCTCGTGCG
GACCTTGCCCGACGGCGTGTATTTCACCGACCTGAAGATGACCGGCAAGAACATCGCCATCGCCGGCGCGGCCGAGTCCA
ACAACCGCGTTTCCAATCTCATGCGCAACATGGACGCGTCCGAGTGGTTGACCGCCCCGACCCTGAACGAGGTCAAGGCG
GTGACCCAGGGCGCGGTGGACCAGGCCAACGTGTTCCAACTGACCGTGCAGCAGACGCAGCCCGGCGAGGAAGACGCCAA
GGCGAAGCATGGGGTTGCGCAAGGAGCCAAGAAATGA
ATGGCACGGATCAACCTTCTACCCTGGCGCGAAGAGCTGCGCGAGCAGCGCAAGCAGCAGTTCCTGGTGATTCTTGGCGG
CGTCCTGGTGGCATCGGCTGCGCTGGTATTCCTTGGCGACCAGTACTTCACCGCGGCCATCGAGAACCAGAACGCCCGCA
ACGACTTCCTGCGCAAGGAAATCGTCGTACTCGACGCCCGGATCAAGGAAATCAGCGAACTGAAGTCGCGGCGCCAGCAA
TTGCTCGAGCGGATGAAGATCATCCAGGACCTGCAGGGCAACCGTCCCATCATCGGACGGGTGTTCGACCAGCTCGTGCG
GACCTTGCCCGACGGCGTGTATTTCACCGACCTGAAGATGACCGGCAAGAACATCGCCATCGCCGGCGCGGCCGAGTCCA
ACAACCGCGTTTCCAATCTCATGCGCAACATGGACGCGTCCGAGTGGTTGACCGCCCCGACCCTGAACGAGGTCAAGGCG
GTGACCCAGGGCGCGGTGGACCAGGCCAACGTGTTCCAACTGACCGTGCAGCAGACGCAGCCCGGCGAGGAAGACGCCAA
GGCGAAGCATGGGGTTGCGCAAGGAGCCAAGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
41.714 |
88.384 |
0.369 |