Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | QUD95_RS08935 | Genome accession | NZ_AP027299 |
| Coordinates | 1932762..1933274 (+) | Length | 170 a.a. |
| NCBI ID | WP_010720497.1 | Uniprot ID | A0A1V8XB86 |
| Organism | Enterococcus hirae strain L6E | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1927762..1938274
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUD95_RS08925 (L6E_17450) | gyrA | 1929513..1932011 (+) | 2499 | WP_088764562.1 | DNA gyrase subunit A | - |
| QUD95_RS08930 (L6E_17460) | rpsF | 1932411..1932710 (+) | 300 | WP_010720498.1 | 30S ribosomal protein S6 | - |
| QUD95_RS08935 (L6E_17470) | ssb | 1932762..1933274 (+) | 513 | WP_010720497.1 | single-stranded DNA-binding protein | Machinery gene |
| QUD95_RS08940 (L6E_17480) | rpsR | 1933300..1933536 (+) | 237 | WP_002288370.1 | 30S ribosomal protein S18 | - |
| QUD95_RS08945 (L6E_17490) | - | 1933684..1934091 (-) | 408 | WP_010736777.1 | hypothetical protein | - |
| QUD95_RS08950 (L6E_17500) | - | 1934330..1936303 (+) | 1974 | WP_034697669.1 | DHH family phosphoesterase | - |
| QUD95_RS08955 (L6E_17510) | rplI | 1936309..1936761 (+) | 453 | WP_010720494.1 | 50S ribosomal protein L9 | - |
| QUD95_RS08960 (L6E_17520) | - | 1937154..1937645 (-) | 492 | WP_034867241.1 | glycine zipper family protein | - |
| QUD95_RS08965 (L6E_17530) | - | 1937694..1937831 (-) | 138 | WP_286335801.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18703.22 Da Isoelectric Point: 4.5567
>NTDB_id=100736 QUD95_RS08935 WP_010720497.1 1932762..1933274(+) (ssb) [Enterococcus hirae strain L6E]
MINNVVLVGRLTKDPDLRYTSSGTAVATFTLAVNRNFTSQNGNREADFINCVIWRKSAETLANYARKGTLLGVTGRIQTR
SYDNQQGQRVYVTEVVAENFQLLESRAASENRQQTGGYQSSGQSTNDFGGSNNYNQTSQSSNGMPDFDRDNSDPFGSSST
IDISDDDLPF
MINNVVLVGRLTKDPDLRYTSSGTAVATFTLAVNRNFTSQNGNREADFINCVIWRKSAETLANYARKGTLLGVTGRIQTR
SYDNQQGQRVYVTEVVAENFQLLESRAASENRQQTGGYQSSGQSTNDFGGSNNYNQTSQSSNGMPDFDRDNSDPFGSSST
IDISDDDLPF
Nucleotide
Download Length: 513 bp
>NTDB_id=100736 QUD95_RS08935 WP_010720497.1 1932762..1933274(+) (ssb) [Enterococcus hirae strain L6E]
TTGATTAATAATGTTGTACTAGTTGGACGTCTAACTAAAGATCCGGATTTACGATATACATCAAGTGGCACTGCAGTAGC
AACGTTTACTTTAGCTGTTAATCGTAATTTTACTAGCCAAAACGGCAATCGTGAGGCTGACTTTATTAATTGTGTGATTT
GGCGTAAATCAGCAGAGACATTAGCAAACTATGCTCGTAAGGGGACTCTTTTAGGAGTTACTGGACGTATCCAAACTCGT
TCTTATGATAATCAGCAAGGACAACGTGTATACGTAACAGAAGTAGTTGCTGAAAACTTCCAATTATTGGAAAGTCGTGC
TGCATCTGAAAATCGTCAACAAACTGGCGGTTACCAAAGCTCTGGTCAATCGACAAATGATTTTGGCGGAAGTAATAACT
ATAATCAAACATCTCAATCATCCAACGGTATGCCTGATTTTGATCGTGACAATTCTGATCCATTTGGTTCAAGTTCAACG
ATCGACATTTCAGACGATGATTTACCATTCTAA
TTGATTAATAATGTTGTACTAGTTGGACGTCTAACTAAAGATCCGGATTTACGATATACATCAAGTGGCACTGCAGTAGC
AACGTTTACTTTAGCTGTTAATCGTAATTTTACTAGCCAAAACGGCAATCGTGAGGCTGACTTTATTAATTGTGTGATTT
GGCGTAAATCAGCAGAGACATTAGCAAACTATGCTCGTAAGGGGACTCTTTTAGGAGTTACTGGACGTATCCAAACTCGT
TCTTATGATAATCAGCAAGGACAACGTGTATACGTAACAGAAGTAGTTGCTGAAAACTTCCAATTATTGGAAAGTCGTGC
TGCATCTGAAAATCGTCAACAAACTGGCGGTTACCAAAGCTCTGGTCAATCGACAAATGATTTTGGCGGAAGTAATAACT
ATAATCAAACATCTCAATCATCCAACGGTATGCCTGATTTTGATCGTGACAATTCTGATCCATTTGGTTCAAGTTCAACG
ATCGACATTTCAGACGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
61.628 |
100 |
0.624 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.542 |
100 |
0.606 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
60.377 |
62.353 |
0.376 |