Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   BACILLUS_RS17430 Genome accession   NZ_CP157504
Coordinates   3359831..3360781 (-) Length   316 a.a.
NCBI ID   WP_013057891.1    Uniprot ID   A0A0B6AV51
Organism   Priestia megaterium strain FA-05     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3354831..3365781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BACILLUS_RS17410 (BACILLUS_003499) - 3355886..3356728 (-) 843 WP_034650592.1 manganese catalase family protein -
  BACILLUS_RS17415 (BACILLUS_003500) - 3357159..3358115 (-) 957 WP_095379262.1 siderophore ABC transporter substrate-binding protein -
  BACILLUS_RS17420 (BACILLUS_003501) - 3358139..3358897 (-) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  BACILLUS_RS17425 (BACILLUS_003502) - 3358891..3359838 (-) 948 WP_016764832.1 iron chelate uptake ABC transporter family permease subunit -
  BACILLUS_RS17430 (BACILLUS_003503) ceuB 3359831..3360781 (-) 951 WP_013057891.1 ABC transporter permease Machinery gene
  BACILLUS_RS17435 (BACILLUS_003504) - 3361180..3361986 (-) 807 WP_095379253.1 cell wall hydrolase -
  BACILLUS_RS17440 (BACILLUS_003505) - 3362349..3362603 (+) 255 WP_013057893.1 hypothetical protein -
  BACILLUS_RS17445 (BACILLUS_003506) - 3362685..3362849 (-) 165 WP_013057894.1 hypothetical protein -
  BACILLUS_RS17450 (BACILLUS_003507) - 3363167..3363511 (-) 345 WP_047932007.1 hypothetical protein -
  BACILLUS_RS17455 (BACILLUS_003508) - 3363554..3364585 (-) 1032 WP_016764835.1 zinc-binding dehydrogenase -
  BACILLUS_RS17460 (BACILLUS_003509) - 3364591..3365637 (-) 1047 WP_016764836.1 galactitol-1-phosphate 5-dehydrogenase -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 35037.32 Da        Isoelectric Point: 9.9188

>NTDB_id=1007336 BACILLUS_RS17430 WP_013057891.1 3359831..3360781(-) (ceuB) [Priestia megaterium strain FA-05]
MKFYQLILVFAVLSILSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1007336 BACILLUS_RS17430 WP_013057891.1 3359831..3360781(-) (ceuB) [Priestia megaterium strain FA-05]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGATTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGCATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCGCTAGTCGGTTTAATGCTCGGCAGTATCGTAAGTTCCTTAGCTACCTTCATCGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
TCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATTGTAAACATTGGATTAGTCATTGTGTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATTCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTGGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGCTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B6AV51

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.318

95.57

0.5


Multiple sequence alignment