Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   G3R43_RS11015 Genome accession   NZ_LR739069
Coordinates   2337543..2337899 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2332543..2342899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3R43_RS10990 (PERCYII40_2194) fabF 2332755..2333999 (+) 1245 WP_003104132.1 beta-ketoacyl-ACP synthase II -
  G3R43_RS10995 (PERCYII40_2195) pabC 2333999..2334814 (+) 816 WP_003091129.1 aminodeoxychorismate lyase -
  G3R43_RS11000 (PERCYII40_2196) mltG 2334820..2335869 (+) 1050 WP_003091127.1 endolytic transglycosylase MltG -
  G3R43_RS11005 (PERCYII40_2197) tmk 2335898..2336530 (+) 633 WP_003122486.1 dTMP kinase -
  G3R43_RS11010 (PERCYII40_2198) - 2336523..2337509 (+) 987 WP_003091122.1 DNA polymerase III subunit delta' -
  G3R43_RS11015 (PERCYII40_2199) pilZ 2337543..2337899 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  G3R43_RS11020 (PERCYII40_2200) - 2337914..2338690 (+) 777 WP_023095396.1 TatD family hydrolase -
  G3R43_RS11025 (PERCYII40_2202) - 2338916..2340049 (-) 1134 WP_003091115.1 aminotransferase class V-fold PLP-dependent enzyme -
  G3R43_RS11030 (PERCYII40_2203) - 2340135..2340773 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  G3R43_RS11035 (PERCYII40_2204) - 2340923..2341819 (+) 897 WP_003091113.1 radical SAM protein -
  G3R43_RS11040 (PERCYII40_2205) - 2341884..2342516 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=1007332 G3R43_RS11015 WP_003091119.1 2337543..2337899(+) (pilZ) [Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=1007332 G3R43_RS11015 WP_003091119.1 2337543..2337899(+) (pilZ) [Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains

Predicted by InterProScan.

PilZ domain (PilZ)

(17-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449
  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449