Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BACILLUS_RS03535 Genome accession   NZ_CP157504
Coordinates   669901..670095 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain FA-05     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 664901..675095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BACILLUS_RS03510 (BACILLUS_000704) galT 664966..666489 (+) 1524 WP_095380149.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  BACILLUS_RS03515 (BACILLUS_000705) - 666532..667416 (-) 885 WP_034654398.1 NAD(P)-dependent oxidoreductase -
  BACILLUS_RS03520 (BACILLUS_000706) - 667619..667807 (-) 189 WP_013055400.1 YjzD family protein -
  BACILLUS_RS03525 (BACILLUS_000707) - 668017..668757 (+) 741 WP_013081744.1 hypothetical protein -
  BACILLUS_RS03530 (BACILLUS_000708) - 668939..669823 (+) 885 WP_034654396.1 NAD(P)-dependent oxidoreductase -
  BACILLUS_RS03535 (BACILLUS_000709) comZ 669901..670095 (+) 195 WP_013081746.1 ComZ family protein Regulator
  BACILLUS_RS03540 (BACILLUS_000710) - 670124..670324 (-) 201 WP_016763038.1 hypothetical protein -
  BACILLUS_RS03545 (BACILLUS_000711) - 670581..671519 (+) 939 WP_016763039.1 beta-ketoacyl-ACP synthase III -
  BACILLUS_RS03550 (BACILLUS_000712) fabF 671559..672800 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  BACILLUS_RS03555 (BACILLUS_000713) - 672907..673680 (+) 774 WP_016763040.1 DUF2268 domain-containing protein -
  BACILLUS_RS03560 (BACILLUS_000714) - 673907..674929 (+) 1023 WP_016763041.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=1007319 BACILLUS_RS03535 WP_013081746.1 669901..670095(+) (comZ) [Priestia megaterium strain FA-05]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=1007319 BACILLUS_RS03535 WP_013081746.1 669901..670095(+) (comZ) [Priestia megaterium strain FA-05]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAACAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGATGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563

Multiple sequence alignment