Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | G3R43_RS02345 | Genome accession | NZ_LR739069 |
| Coordinates | 526658..527023 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 521658..532023
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3R43_RS02315 (PERCYII40_0465) | pyrR | 522280..522792 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| G3R43_RS02320 (PERCYII40_0466) | ruvX | 522904..523338 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| G3R43_RS02325 (PERCYII40_0467) | - | 523338..523907 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| G3R43_RS02330 (PERCYII40_0468) | - | 523956..524849 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| G3R43_RS02335 (PERCYII40_0469) | gshB | 524996..525949 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| G3R43_RS02340 (PERCYII40_0470) | pilG | 526204..526611 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| G3R43_RS02345 (PERCYII40_0471) | pilH | 526658..527023 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| G3R43_RS02350 (PERCYII40_0472) | - | 527074..527610 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| G3R43_RS02355 (PERCYII40_0473) | pilJ | 527695..529743 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| G3R43_RS02360 (PERCYII40_0474) | pilK | 529804..530679 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=1007308 G3R43_RS02345 WP_003084587.1 526658..527023(+) (pilH) [Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=1007308 G3R43_RS02345 WP_003084587.1 526658..527023(+) (pilH) [Pseudomonas aeruginosa strain PcyII-40 isolate PcyII-40]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |