Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   GPW69_RS06680 Genome accession   NZ_LR738724
Coordinates   1350756..1351238 (+) Length   160 a.a.
NCBI ID   WP_074391859.1    Uniprot ID   A0AA97A1D6
Organism   Streptococcus suis isolate 9401240     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1345756..1356238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPW69_RS06650 - 1345785..1346933 (+) 1149 WP_044763959.1 cobalamin-independent methionine synthase II family protein -
  GPW69_RS06655 - 1347004..1348314 (-) 1311 WP_044683219.1 GntP family permease -
  GPW69_RS06660 folK 1348365..1348853 (-) 489 WP_024400722.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  GPW69_RS06665 folB 1348850..1349212 (-) 363 WP_074391862.1 dihydroneopterin aldolase -
  GPW69_RS06670 folP 1349205..1350017 (-) 813 WP_074391861.1 dihydropteroate synthase -
  GPW69_RS06675 folE 1350026..1350589 (-) 564 WP_074391860.1 GTP cyclohydrolase I FolE -
  GPW69_RS06680 mutX 1350756..1351238 (+) 483 WP_074391859.1 NUDIX hydrolase Machinery gene
  GPW69_RS06685 - 1351282..1351959 (-) 678 WP_024407416.1 DUF4956 domain-containing protein -
  GPW69_RS06690 - 1351946..1352689 (-) 744 WP_074391858.1 polyphosphate polymerase domain-containing protein -
  GPW69_RS06695 - 1352882..1353184 (+) 303 WP_074391857.1 hypothetical protein -
  GPW69_RS06700 - 1353397..1353627 (-) 231 WP_074391856.1 DUF2087 domain-containing protein -
  GPW69_RS06705 pheT 1353682..1356081 (-) 2400 WP_074391855.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18567.92 Da        Isoelectric Point: 4.5662

>NTDB_id=1007163 GPW69_RS06680 WP_074391859.1 1350756..1351238(+) (mutX) [Streptococcus suis isolate 9401240]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLENRPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=1007163 GPW69_RS06680 WP_074391859.1 1350756..1351238(+) (mutX) [Streptococcus suis isolate 9401240]
ATGACCAAGAAACCCGTCCAACTCGCTACGATTTGCTACATTGATAATGGTAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAACGATGTCCATCAAGGAAAATGGATTGGAGTTGGTGGTAAACTAGAACCTGGCGAAACACCACAGGCTTGTG
CCATTCGAGAAGTCTTTGAGGAAACTGGGCTTACTGTAACAAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTTTGATTGATTGCAACGAAGGCGA
TTTAGAATGGGTTCCTTATGACCAAGTGCTCTCCAAACCAACTTGGGAAGGCGATCGCCATTTTCAAGAGTGGCTCTTGG
AAAACCGTCCCTTCTTCTCTGCATGCTTTCGCTATGATGGGGATAAACTGCTGGATTACAGCGTTGATTTTTATGAGGAG
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA97A1D6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

79.739

95.625

0.763