Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   GPW69_RS02245 Genome accession   NZ_LR738724
Coordinates   429508..430284 (+) Length   258 a.a.
NCBI ID   WP_074391582.1    Uniprot ID   -
Organism   Streptococcus suis isolate 9401240     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 424508..435284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPW69_RS02230 - 424974..425087 (+) 114 Protein_387 IS3 family transposase -
  GPW69_RS10680 - 426328..427800 (+) 1473 WP_024378623.1 plasmid recombination protein -
  GPW69_RS02240 rlmD 428121..429470 (-) 1350 Protein_389 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  GPW69_RS02245 recX 429508..430284 (+) 777 WP_074391582.1 recombination regulator RecX Regulator
  GPW69_RS02250 - 430360..430893 (+) 534 WP_004194106.1 DUF402 domain-containing protein -
  GPW69_RS02255 - 430951..431268 (+) 318 WP_004194104.1 DUF960 domain-containing protein -
  GPW69_RS02260 - 431368..432099 (+) 732 WP_074391581.1 GntR family transcriptional regulator -
  GPW69_RS02265 - 432239..432949 (-) 711 WP_015646515.1 GntR family transcriptional regulator -
  GPW69_RS02270 - 433171..434943 (+) 1773 WP_074391580.1 glycoside hydrolase family 35 protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30529.05 Da        Isoelectric Point: 9.2585

>NTDB_id=1007136 GPW69_RS02245 WP_074391582.1 429508..430284(+) (recX) [Streptococcus suis isolate 9401240]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQEFRELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYL
KKYEIEENNIVKIVTVLEEEKWLDDGNYVDSYVRQNALNGDKGPAMIRQKLMQKGIPKPLIDKRLAEEDFSELARKIGEK
LEGRYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDDLIAKELDKQYRKYSRKYEGYELKQRLIQAL
ARKGYDFDRIQAVLRDYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1007136 GPW69_RS02245 WP_074391582.1 429508..430284(+) (recX) [Streptococcus suis isolate 9401240]
ATGAGAATTACAAAAATTGAAAAGAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTATATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGAAAGGAAATCACGGAGCAGGAGTTTCGTGAGCTTCGCGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCCTTCAAGCAACGTACCAAAAAAGAAGTTAGTGATTATCTA
AAAAAATATGAAATTGAAGAAAACAATATTGTCAAGATAGTGACGGTATTAGAAGAGGAAAAATGGCTGGACGATGGGAA
TTATGTTGATAGCTATGTCCGTCAGAATGCTCTAAATGGAGATAAGGGACCAGCTATGATTCGGCAGAAGTTGATGCAGA
AAGGAATTCCTAAACCGCTGATTGATAAAAGACTGGCTGAGGAAGATTTTTCAGAGCTTGCTAGGAAGATTGGGGAGAAA
TTGGAGGGTAGATACCAAAGAAAATTACCTCTTCGAGCTTTGCAAGATAAAGTTGTGCAGGGATTGATGGGGAAGGGGTT
TTCTTATGAGACGGCCAAACAAAGCCTGGGTCAGTTGGAACTTGTGGCTGATGAGGAAAATGAAGATGATTTAATCGCCA
AGGAATTGGATAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGCTACGAATTGAAGCAAAGGTTGATACAGGCTTTG
GCTCGAAAGGGTTATGACTTTGATCGGATTCAGGCTGTCCTTCGTGATTATCTGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.955

100

0.372

Multiple sequence alignment