Detailed information NTG1007069

Bioinformatically predicted

Overview

• Name: rexA
• Type: Machinery gene
• Locus tag: GPW68_RS06300
• Genome accession: NZ_LR738723
• Coordinates: 1242434..1246087 (-)
• Length: 1217 a.a.
• NCBI ID: WP_161945206.1
• Uniprot ID: -
• Organism: Streptococcus suis isolate GD-0088
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1237434..1251087

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPW68_RS06275	-	1237783..1238343 (-)	561	WP_074389099.1	GTP pyrophosphokinase	-
GPW68_RS06280	-	1238372..1238875 (-)	504	WP_074389100.1	YkvA family protein	-
GPW68_RS06285	fic	1238908..1239510 (-)	603	WP_074411825.1	protein adenylyltransferase Fic	-
GPW68_RS06290	parE	1239534..1241483 (-)	1950	WP_074389101.1	DNA topoisomerase IV subunit B	-
GPW68_RS06295	plsY	1241626..1242327 (+)	702	WP_074389102.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-
GPW68_RS06300	rexA	1242434..1246087 (-)	3654	WP_161945206.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
GPW68_RS06305	rexB	1246087..1249353 (-)	3267	WP_074389104.1	ATP-dependent nuclease subunit B	Machinery gene

Sequence

Protein

• Length: 1217 a.a.
• Molecular weight: 139767.17 Da
• Isoelectric Point: 5.0884

>NTDB_id=1007069 GPW68_RS06300 WP_161945206.1 1242434..1246087(-) (rexA) [Streptococcus suis isolate GD-0088]
MAFEQFLSAEEIKAVQLAEANSDKQQKRTPEQIEAIYTHGQNVLVSASAGSGKTFVMVQRILDKLKRGVGIDQLFISTFT
VKAAGELKERIEKNLNETIAETTDMDLRRHLSAQLADLTKADIGTMDSFTQKLVTTYGYSLGISPQFRILQDETEKASLK
KEVFDQLFADYLEQDENGEFRKLVGNFSGNRKDNSGFRQVVYQVHDFSQSTSSPTKWLKEQAVQADLYSQERIEQILEQG
FKEKVLDKLYQAAEFFRYHVEWGRNDFGSAKYFANVEEVLDLLTGLDSLDQKDLMERVERILLINDQSRGKGLTNANRPK
DEHLIAFKEEYNAGKSQIISGLRDLGQEVYELTLLKDYQVQAVPLLILLRDFVLGFSQAYLDVKIKEAAFEFGDIGHFAI
RILEENADIRQFFQEKYQEVMVDEYQDNNHSQERMLDLLSNGHNRFMVGDIKQSIYRFRQADPMIFQEKFELYQANPQAG
KLILLKENFRSQIEVLEATNAIFTRLMDRQVGEIKYDDTHSLVAGSPGQKIAQPKHEMEYLIYDQQDSANSSRDAEEETP
LTAGEIEVVAKEIIRLHNEDGADFKDITLLVQKRTHNDLIMSIFEKHGIPIVADGGAASYLQSLEVMIMLDTLRVINNPL
NDYALVALLKSPMFRFDEDELTRISLQAGTGFFYQKMEIAQQTNGQHPELMSGELKKKIKDFLSILENWRAYAKLHSIYD
LIWKIFNEKFYYDYVGALPNGSKRQANLYALGLRANQFEKTGYKGLSRFIAMIDRALANDKDLADVQEFLPQNAVQLMTI
HKSKGLEFKYVFLMNIDKRFNLEDHYQSVIISRKNGLGIQYLADMKDKVKSPLPQVRVLMNTLPYQNNLQELKIANLSEQ
MRLLYVALTRAEKKLYLVGKGNADKLAEKYDGKKENGVLAKSTRESMATFQDWILAIDEAFSGEDLHFKKVFVTDEDLTE
EKIGKLTLKSKLEDASLKDIRQSEDIAQALDQLSSVQELNERYKAAIELPSLRTPSQIKKLYEPILEQEGMEVMEKYQPK
RTFNLPDFSKKPKITGAQVGSAVHELMQRLDLSWLVTEDTVREALEAVYVEQAVKDKINVQMILDFFDTDLGREILANTD
KLHREAPFASLQTDSLSQENFVLRGIIDGYLLYDDHIVLFDYKTDKYDQPIQLSQRYQAQMQLYAEALKKAYKINRVDCH
LILLGGERIEVVEVKIN

Nucleotide

• Length: 3654 bp

>NTDB_id=1007069 GPW68_RS06300 WP_161945206.1 1242434..1246087(-) (rexA) [Streptococcus suis isolate GD-0088]
ATGGCTTTTGAACAATTTTTAAGCGCAGAAGAAATCAAGGCTGTGCAGCTGGCTGAAGCTAATTCTGATAAGCAACAAAA
ACGCACACCTGAGCAGATTGAAGCCATCTACACGCACGGTCAGAATGTTCTGGTCTCTGCATCGGCTGGGTCAGGAAAGA
CCTTCGTCATGGTTCAACGGATTTTGGATAAGTTGAAGCGTGGCGTCGGGATTGACCAGCTCTTTATCTCGACCTTTACA
GTCAAGGCAGCTGGTGAGTTGAAGGAGCGGATCGAGAAAAATCTCAATGAAACCATTGCGGAGACGACGGATATGGACTT
GCGCCGGCATTTGTCAGCTCAGTTGGCAGATTTGACCAAGGCGGATATTGGAACCATGGACTCCTTTACGCAGAAATTGG
TAACGACTTACGGTTATAGCCTTGGTATTTCTCCGCAGTTTCGGATTTTACAGGATGAGACAGAAAAAGCGAGTCTGAAA
AAAGAGGTTTTTGACCAGCTCTTTGCAGATTATCTTGAACAGGATGAAAATGGTGAGTTCCGCAAACTGGTTGGCAATTT
TTCTGGCAACCGTAAGGATAATAGTGGTTTCCGTCAGGTTGTTTATCAGGTGCATGATTTTAGTCAATCGACCAGCAGTC
CAACTAAATGGCTGAAAGAGCAGGCTGTTCAAGCTGATTTGTACAGTCAAGAGCGTATTGAACAAATCTTAGAGCAGGGC
TTTAAGGAAAAAGTGTTAGACAAGCTCTATCAAGCTGCAGAGTTCTTCCGCTACCATGTGGAATGGGGTAGAAATGACTT
TGGTTCCGCTAAGTATTTTGCAAATGTGGAAGAAGTTTTAGATTTGCTGACAGGTTTAGATAGTCTGGACCAGAAGGACT
TGATGGAACGGGTTGAAAGAATCCTTCTCATCAATGACCAGTCCAGAGGCAAGGGTTTGACCAATGCCAATCGACCAAAA
GATGAGCATTTGATAGCCTTTAAAGAAGAATACAATGCTGGCAAGAGCCAGATTATCTCAGGACTACGAGATTTGGGTCA
GGAAGTTTATGAATTGACCCTGCTGAAAGATTATCAGGTTCAAGCTGTGCCCTTGCTGATATTATTACGTGACTTTGTCT
TGGGTTTTTCGCAGGCTTATCTGGATGTCAAAATCAAGGAAGCAGCTTTTGAATTTGGCGATATTGGGCATTTCGCTATT
CGCATTTTAGAAGAAAATGCGGACATTCGCCAGTTTTTCCAAGAAAAATACCAGGAAGTCATGGTGGACGAGTACCAGGA
TAACAACCATAGCCAAGAGCGAATGTTAGACCTGCTGTCTAACGGTCACAACCGCTTTATGGTGGGTGATATTAAGCAGT
CCATCTATCGATTCCGTCAGGCGGATCCAATGATTTTCCAAGAGAAATTTGAACTTTATCAGGCAAATCCTCAGGCTGGG
AAATTGATTTTGCTCAAGGAAAATTTCCGTAGTCAGATTGAGGTCTTGGAGGCGACTAATGCCATTTTCACGCGGCTGAT
GGACCGTCAAGTAGGGGAAATCAAGTATGACGACACCCACAGTCTAGTGGCTGGTAGTCCTGGTCAAAAAATTGCCCAGC
CCAAGCATGAGATGGAATACTTGATTTACGACCAGCAGGATAGCGCAAACTCTTCAAGGGATGCTGAGGAAGAAACACCT
CTGACTGCTGGTGAAATTGAGGTCGTTGCAAAAGAGATTATTCGTCTTCACAATGAAGATGGAGCAGACTTCAAGGACAT
CACTCTCTTGGTGCAAAAGAGGACGCACAATGATCTCATTATGTCCATTTTTGAAAAACATGGGATTCCTATTGTGGCAG
ATGGCGGAGCAGCCTCCTATCTGCAATCTTTAGAAGTCATGATTATGCTGGATACCTTGAGGGTTATCAATAATCCACTC
AATGACTATGCCTTGGTTGCCCTGCTTAAATCGCCCATGTTCCGATTCGATGAAGATGAACTGACACGGATTTCCTTGCA
GGCTGGGACAGGTTTCTTTTACCAGAAAATGGAAATAGCCCAGCAAACAAATGGGCAACATCCTGAACTTATGTCAGGAG
AGTTGAAGAAGAAAATCAAGGATTTCTTGTCTATTTTGGAAAACTGGCGTGCCTATGCCAAACTGCATTCTATTTATGAC
CTGATTTGGAAGATTTTCAATGAAAAATTCTACTATGACTATGTCGGTGCTCTTCCAAATGGCAGCAAGCGTCAGGCCAA
TCTATACGCACTTGGTTTGCGTGCCAACCAGTTTGAAAAAACAGGCTACAAGGGCTTGTCCCGCTTCATCGCCATGATTG
ACCGTGCCTTAGCAAATGATAAGGATTTGGCAGATGTACAAGAGTTTCTACCGCAAAATGCTGTTCAGCTGATGACCATT
CATAAGTCAAAAGGTCTGGAGTTCAAATATGTCTTCCTCATGAACATCGATAAGCGATTCAACTTGGAAGACCATTACCA
GTCAGTCATCATCAGCCGGAAAAATGGTCTAGGTATCCAATATTTAGCGGATATGAAAGATAAGGTAAAAAGCCCATTAC
CTCAGGTGCGAGTCTTAATGAACACCCTTCCTTATCAAAATAATCTCCAAGAGCTAAAAATTGCCAATCTTTCAGAACAA
ATGCGGTTGCTTTATGTTGCACTAACGCGTGCCGAGAAGAAGCTGTATCTGGTTGGAAAGGGCAATGCTGACAAGTTAGC
TGAAAAATACGATGGCAAAAAGGAAAATGGCGTACTTGCCAAGTCAACTCGTGAAAGCATGGCGACCTTCCAAGACTGGA
TTCTAGCCATTGATGAGGCCTTCTCAGGAGAAGATTTGCACTTCAAGAAAGTCTTTGTGACGGACGAGGATTTGACAGAG
GAGAAGATTGGTAAACTTACATTGAAGAGTAAGCTAGAAGACGCCAGTCTTAAAGATATTCGTCAATCAGAAGACATCGC
CCAGGCCTTGGACCAGCTGTCTTCTGTCCAAGAGTTGAACGAACGCTATAAGGCTGCCATTGAATTGCCAAGTTTACGGA
CTCCAAGTCAAATCAAGAAACTCTATGAGCCTATTTTGGAACAAGAAGGCATGGAAGTTATGGAAAAATACCAGCCAAAA
CGGACCTTCAACTTGCCAGATTTCTCCAAGAAACCAAAAATCACTGGAGCCCAAGTTGGTTCAGCAGTTCATGAACTTAT
GCAACGTTTGGATCTGTCTTGGTTGGTGACAGAAGATACGGTAAGAGAAGCTCTAGAAGCTGTTTATGTTGAGCAAGCGG
TTAAAGATAAAATCAATGTTCAGATGATTTTGGATTTCTTTGATACAGACTTAGGAAGAGAAATTCTAGCCAATACCGAT
AAACTCCACCGAGAAGCTCCATTTGCAAGTTTGCAGACAGATTCTTTGTCACAGGAAAACTTTGTCCTTCGTGGGATTAT
CGATGGCTACCTACTATATGATGATCATATTGTCCTCTTTGATTATAAGACAGACAAATATGACCAACCAATCCAACTCA
GCCAACGTTACCAAGCTCAAATGCAACTCTACGCAGAGGCGTTGAAAAAAGCCTACAAGATAAATCGTGTAGACTGCCAT
TTGATTTTGCTTGGTGGGGAGAGGATTGAAGTGGTTGAAGTCAAAATAAATTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (1037-1192)

• UvrD-like helicase C-terminal domain (UvrD_C) (483-897)

• UvrD/REP helicase N-terminal domain (UvrD-helicase) (29-471)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexA	Streptococcus pneumoniae R6	52.167	100	0.524