Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ABK833_RS26255 | Genome accession | NZ_CP157459 |
| Coordinates | 5590559..5591116 (+) | Length | 185 a.a. |
| NCBI ID | WP_019486632.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa PA103 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5585559..5596116
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABK833_RS26235 (ABK833_26215) | pilR | 5586835..5588172 (+) | 1338 | WP_003110427.1 | two-component system response regulator PilR | Regulator |
| ABK833_RS26240 (ABK833_26220) | thiO | 5588218..5589312 (-) | 1095 | WP_023094393.1 | glycine oxidase ThiO | - |
| ABK833_RS26245 (ABK833_26225) | - | 5589447..5589956 (+) | 510 | WP_019486634.1 | Tfp pilus assembly protein FimT/FimU | - |
| ABK833_RS26250 (ABK833_26230) | - | 5590062..5590568 (+) | 507 | WP_019486633.1 | Tfp pilus assembly protein FimT/FimU | - |
| ABK833_RS26255 (ABK833_26235) | pilV | 5590559..5591116 (+) | 558 | WP_019486632.1 | type 4a pilus minor pilin PilV | Machinery gene |
| ABK833_RS26260 (ABK833_26240) | pilW | 5591113..5591937 (+) | 825 | WP_023094394.1 | type 4a pilus minor pilin PilW | - |
| ABK833_RS26265 (ABK833_26245) | pilX | 5591934..5592521 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| ABK833_RS26270 (ABK833_26250) | pilY1 | 5592533..5596018 (+) | 3486 | WP_019486630.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20086.26 Da Isoelectric Point: 7.9204
>NTDB_id=1007031 ABK833_RS26255 WP_019486632.1 5590559..5591116(+) (pilV) [Pseudomonas aeruginosa PA103]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPTSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPTSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1007031 ABK833_RS26255 WP_019486632.1 5590559..5591116(+) (pilV) [Pseudomonas aeruginosa PA103]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAGTCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGAATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGACCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAGTCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGAATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGACCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
97.838 |
100 |
0.978 |