Detailed information NTG1006995

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ABLB95_RS13205
• Genome accession: NZ_CP157451
• Coordinates: 2801377..2802435 (-)
• Length: 352 a.a.
• NCBI ID: WP_005024205.1
• Uniprot ID: A0A2T1J1Z2
• Organism: Acinetobacter radioresistens strain XH1688
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2796377..2807435

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLB95_RS13180 (ABLB95_13170)	aroK	2796701..2797252 (-)	552	WP_005018052.1	shikimate kinase AroK	-
ABLB95_RS13185 (ABLB95_13175)	pilQ	2797289..2799469 (-)	2181	WP_348908901.1	type IV pilus secretin PilQ family protein	Machinery gene
ABLB95_RS13190 (ABLB95_13180)	pilP	2799487..2800014 (-)	528	WP_005018049.1	pilus assembly protein PilP	Machinery gene
ABLB95_RS13195 (ABLB95_13185)	comO	2800011..2800721 (-)	711	WP_005404626.1	type 4a pilus biogenesis protein PilO	Machinery gene
ABLB95_RS13200 (ABLB95_13190)	pilN	2800718..2801377 (-)	660	WP_138000910.1	PilN domain-containing protein	Machinery gene
ABLB95_RS13205 (ABLB95_13195)	comM	2801377..2802435 (-)	1059	WP_005024205.1	pilus assembly protein PilM	Machinery gene
ABLB95_RS13210 (ABLB95_13200)	ponA	2802597..2805143 (+)	2547	WP_034688125.1	penicillin-binding protein PBP1a	-
ABLB95_RS13215 (ABLB95_13205)	-	2805190..2805996 (-)	807	WP_034682939.1	putative RNA methyltransferase	-
ABLB95_RS13220 (ABLB95_13210)	mraY	2806063..2807181 (-)	1119	WP_005018035.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38898.47 Da
• Isoelectric Point: 4.4198

>NTDB_id=1006995 ABLB95_RS13205 WP_005024205.1 2801377..2802435(-) (comM) [Acinetobacter radioresistens strain XH1688]
MLRLYRKPNKGLVGIDVSSTSVKLLELSVKGGRYWVESYGLYPLSDGSVVEKNILNPEAVADALERVIDIANPQAANAAF
AVPTSAVINKVIEMDADMNDDEREVQIRMDAEQYIPFPLDEVSLDFEVLPDILANPDRVNVLLVATRTENVDARVEVLEM
AGLTAKIADVESYALERAFKVFADTLPIGVNTVGILDIGHTMTTLSVMQHGKIIYTREQVFGGKQLTQDIQNRYGLSYEE
AGRAKKERNLPDDYDIEILEPFLEALVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFAPQVDVQKVEKDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1006995 ABLB95_RS13205 WP_005024205.1 2801377..2802435(-) (comM) [Acinetobacter radioresistens strain XH1688]
GTGCTCAGGTTATATCGTAAACCAAATAAAGGATTAGTCGGAATAGATGTAAGTTCTACTTCGGTTAAATTATTAGAGCT
CTCTGTAAAAGGTGGCAGATACTGGGTTGAAAGTTACGGGCTTTATCCGCTTTCCGATGGAAGTGTCGTTGAAAAAAATA
TTCTGAATCCTGAAGCGGTTGCCGATGCTTTAGAGCGCGTAATTGACATTGCTAACCCTCAGGCGGCTAATGCGGCTTTT
GCAGTACCTACTTCGGCGGTGATTAATAAAGTCATCGAGATGGATGCAGACATGAACGATGATGAACGTGAAGTTCAGAT
CCGTATGGATGCAGAGCAATATATTCCTTTTCCTTTAGACGAAGTCAGTCTTGATTTTGAAGTGTTGCCAGATATATTGG
CAAATCCTGATCGAGTAAATGTACTGCTGGTGGCCACCCGTACTGAAAATGTAGATGCACGTGTCGAAGTGCTGGAAATG
GCCGGTCTAACTGCGAAAATTGCTGATGTAGAAAGTTATGCGCTAGAACGTGCGTTTAAAGTGTTCGCTGATACATTGCC
TATAGGGGTGAATACTGTAGGTATTCTAGATATTGGCCACACCATGACAACTTTGTCTGTCATGCAGCATGGCAAGATTA
TCTATACTCGCGAGCAGGTTTTTGGTGGAAAGCAGCTGACTCAGGACATTCAGAATCGTTATGGCCTTTCCTATGAAGAA
GCTGGCCGGGCCAAAAAAGAGCGTAATTTGCCAGATGATTATGATATTGAAATACTCGAGCCTTTCTTAGAGGCCTTAGT
GCAACAGGCTGCTCGTTCTTTGCAGTTTTTTTTCTCGTCTTCACAGTTTAATGAGATTGATCATATTTTATTGGCAGGTG
GAAATGCCAACATACCGGGACTGGCCAAACTACTCCAACAAAAGCTGGGCTACCGGGTAACAATTGCCAATCCATTTTTA
CAGATGGGTTTTGCGCCGCAGGTTGATGTACAAAAAGTTGAAAAAGATGCATCTTCACTCATGGTGGCTTGTGGTTTGGC
GCTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A2T1J1Z2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.375	100	0.844
pilM	Acinetobacter baumannii D1279779	84.375	100	0.844
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42