Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ABLB95_RS01725 Genome accession   NZ_CP157451
Coordinates   369618..371843 (-) Length   741 a.a.
NCBI ID   WP_348908569.1    Uniprot ID   -
Organism   Acinetobacter radioresistens strain XH1688     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 364618..376843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABLB95_RS01705 (ABLB95_01705) - 364882..365835 (-) 954 WP_005405721.1 DnaJ C-terminal domain-containing protein -
  ABLB95_RS01710 (ABLB95_01710) - 365991..366452 (-) 462 WP_005016918.1 DUF2147 domain-containing protein -
  ABLB95_RS01715 (ABLB95_01715) - 366777..367652 (-) 876 WP_005023129.1 Hsp33 family molecular chaperone HslO -
  ABLB95_RS01720 (ABLB95_01720) - 367702..369534 (-) 1833 WP_348908571.1 cation:proton antiporter -
  ABLB95_RS01725 (ABLB95_01725) priA 369618..371843 (-) 2226 WP_348908569.1 primosomal protein N' Machinery gene
  ABLB95_RS01730 (ABLB95_01730) gspF 371999..373204 (+) 1206 WP_026444087.1 type II secretion system inner membrane protein GspF -
  ABLB95_RS01735 (ABLB95_01735) gspG 373242..373679 (+) 438 WP_026444088.1 type II secretion system major pseudopilin GspG -
  ABLB95_RS01740 (ABLB95_01740) - 374016..374351 (+) 336 WP_026444089.1 hypothetical protein -
  ABLB95_RS01745 (ABLB95_01745) lnt 374429..375988 (-) 1560 WP_348908566.1 apolipoprotein N-acyltransferase -
  ABLB95_RS01750 (ABLB95_01750) - 375985..376824 (-) 840 WP_005016900.1 HlyC/CorC family transporter -

Sequence

Protein


Download         Length: 741 a.a.        Molecular weight: 84152.34 Da        Isoelectric Point: 9.1601

>NTDB_id=1006967 ABLB95_RS01725 WP_348908569.1 369618..371843(-) (priA) [Acinetobacter radioresistens strain XH1688]
MPSSSHNNCCIYRVRVAVPVHLYDSFDYLLSAEQYLQAEVGARVAVSFGRQNLIGIIVEKISPDVMPDPRIKLKAITELL
DKEAIIDSKVLSLLTWSAQYYQFPLGEVMQCALPGLLRQGKPLNLLARVWKVVQPDAEQLLKRSIKQQDAYKILKLHAAG
TTEDILNLSGVETATLKALEKKEIVRCELTAINTTPEPVQLAQMPLTPNEDQHKAIQRILKSLKKFQAFLLDGLTGSGKT
EVYLQVMYEVLKQGKQILVLVPEIGLTPQTISRFKSRFNVDIVLLHSGLSESKRLQAWQHAQTGKASIILGTRSAIYTSL
PRLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSLDSYHLVEQNKLTRLELNQRAGNAVLPKMQL
IDLKVAKKQHGISEQLIKQIQQRLDKKEQVLVFLNRRGYAPVLVCNHCGWQANCPHCDAHFTLHTQPYNHLHCHHCGSIH
RVPESCPECQQTTLKTLGMGTAKVEETLTELFPDFDVIRVDRDSTSRVGQWDRIYQRIHQSQPAILLGTQMLAKGHHFPY
VTLVAILDIDAGLLSFDFRAPERTAQLIIQVAGRAGRGDRRGEVYLQTLRPDHPLLTTLIEKDYRAFAKQALIERQQAQL
PPYRYTVLVRADSRNQQYSQEFVAEIARKLRELAGSQVDIWGPIPAPMERKAGRYRAHLVLLSADRAQLHFYLRQWWAMV
VQQSRQHQLKLSIDVDPQELS

Nucleotide


Download         Length: 2226 bp        

>NTDB_id=1006967 ABLB95_RS01725 WP_348908569.1 369618..371843(-) (priA) [Acinetobacter radioresistens strain XH1688]
ATGCCTAGCTCGTCCCATAATAACTGCTGTATATACCGTGTCCGGGTAGCTGTACCTGTTCATCTCTATGATAGTTTTGA
CTATCTGCTTAGTGCCGAACAATACTTACAGGCAGAAGTCGGTGCGCGGGTAGCAGTATCTTTTGGACGGCAAAATCTGA
TTGGTATCATTGTAGAGAAAATTTCTCCCGATGTTATGCCTGATCCGCGTATCAAACTTAAGGCTATTACTGAGCTGCTC
GACAAGGAAGCCATTATAGACAGCAAAGTTTTAAGTTTGTTGACATGGTCTGCGCAGTATTATCAATTTCCTTTGGGTGA
GGTAATGCAATGTGCTCTACCCGGCCTGTTGCGTCAGGGTAAACCGCTAAATCTGCTGGCTCGAGTCTGGAAGGTGGTAC
AGCCTGATGCAGAACAGCTGCTCAAGCGTTCAATCAAGCAGCAAGATGCTTATAAGATTTTAAAATTACATGCAGCCGGT
ACAACAGAAGATATTCTGAATTTAAGTGGTGTTGAAACTGCCACTTTAAAAGCTCTTGAAAAAAAAGAAATTGTCCGCTG
TGAATTAACAGCAATAAATACCACGCCTGAACCGGTGCAGCTGGCACAAATGCCACTCACACCCAATGAAGATCAGCACA
AAGCAATTCAGCGTATTTTAAAATCCTTGAAGAAATTTCAGGCCTTCTTACTTGATGGTTTGACTGGTAGCGGCAAAACA
GAAGTTTATTTGCAGGTGATGTACGAGGTACTAAAACAGGGCAAGCAGATATTGGTTCTGGTTCCCGAAATCGGGTTGAC
ACCTCAAACCATTTCCCGTTTTAAATCACGGTTTAATGTAGATATTGTACTATTACATTCTGGTTTGAGTGAATCCAAAC
GTTTGCAAGCATGGCAGCATGCCCAAACCGGCAAGGCTTCCATTATTCTCGGAACCCGCTCAGCAATTTATACGTCGTTG
CCCCGGCTGGGACTGATTATTCTGGATGAGGAGCATGATCTGTCATTCAAGCAACAGGAAGGCTTTCGCTACCATGCCCG
TGACGTAGCTCTCTACCGTGCCCATCTGGAAAACTGTCCGATTATTCTTGGCTCAGCCACACCCAGTCTGGATAGCTATC
ATCTGGTAGAACAGAATAAACTGACACGACTGGAACTTAACCAGCGGGCTGGCAATGCGGTCTTACCCAAAATGCAGTTA
ATAGATCTGAAAGTAGCCAAAAAACAGCATGGAATTAGTGAACAGCTCATCAAGCAGATTCAGCAGCGGCTGGACAAAAA
AGAACAGGTGCTGGTTTTTTTAAACCGGCGTGGTTATGCGCCGGTACTGGTCTGTAATCATTGTGGCTGGCAGGCCAACT
GCCCCCATTGTGATGCCCATTTTACTCTGCATACACAGCCCTATAATCATCTGCACTGTCATCATTGTGGTTCCATTCAT
CGTGTACCGGAAAGCTGTCCCGAATGTCAGCAAACGACCTTAAAAACGCTCGGGATGGGCACTGCCAAGGTTGAAGAAAC
CCTGACCGAGCTCTTTCCAGATTTTGATGTAATTCGTGTGGACCGTGACAGTACCAGCCGGGTTGGCCAATGGGACCGTA
TCTATCAGCGGATTCATCAAAGCCAGCCTGCTATTTTACTCGGTACCCAAATGTTAGCCAAGGGCCATCATTTTCCCTAC
GTGACCTTGGTTGCGATTCTGGATATTGATGCCGGACTGCTCAGCTTTGATTTTCGTGCGCCGGAACGTACAGCCCAGCT
CATCATTCAGGTGGCTGGTCGTGCTGGCCGTGGAGACCGCAGAGGCGAAGTCTATCTGCAAACTTTAAGGCCTGATCATC
CACTGTTAACTACATTGATCGAGAAAGACTACCGTGCTTTTGCCAAACAAGCACTCATTGAGCGCCAGCAGGCACAGCTG
CCGCCTTATCGTTATACGGTACTGGTACGAGCCGACTCCAGAAACCAGCAATACAGTCAGGAATTTGTAGCTGAAATTGC
TCGTAAGCTACGTGAACTTGCAGGTAGTCAGGTTGATATCTGGGGCCCTATCCCTGCCCCTATGGAGCGTAAGGCGGGTC
GCTACCGGGCCCATCTGGTCCTGCTTTCAGCTGACCGGGCACAGCTGCATTTTTATTTACGGCAATGGTGGGCGATGGTA
GTACAACAGTCACGACAGCATCAGTTAAAGCTGAGTATCGACGTTGACCCGCAGGAACTCAGCTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(207-369)

Primosomal protein N C-terminal domain (PriA_C)

(642-737)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

75.646

99.19

0.75

Multiple sequence alignment