Detailed information NTG1006806

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABLC00_RS08360
• Genome accession: NZ_CP157432
• Coordinates: 1803525..1804340 (+)
• Length: 271 a.a.
• NCBI ID: WP_033846335.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain XH1679
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1798525..1809340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLC00_RS08325 (ABLC00_08325)	kdsB	1799050..1799811 (+)	762	WP_004887485.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ABLC00_RS08330 (ABLC00_08330)	-	1799823..1800803 (+)	981	WP_004887483.1	DNA polymerase III subunit delta'	-
ABLC00_RS08335 (ABLC00_08335)	-	1800816..1801157 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ABLC00_RS08340 (ABLC00_08340)	-	1801175..1801948 (+)	774	WP_004887481.1	TatD family hydrolase	-
ABLC00_RS08345 (ABLC00_08345)	-	1801986..1802594 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABLC00_RS08350 (ABLC00_08350)	-	1802604..1803155 (+)	552	WP_002049902.1	type II secretion system protein	-
ABLC00_RS08355 (ABLC00_08355)	xcpV	1803145..1803525 (+)	381	WP_004887479.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABLC00_RS08360 (ABLC00_08360)	xcpW	1803525..1804340 (+)	816	WP_033846335.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABLC00_RS08365 (ABLC00_08365)	gspK	1804340..1805299 (+)	960	WP_004887476.1	type II secretion system minor pseudopilin GspK	-
ABLC00_RS08370 (ABLC00_08370)	-	1805529..1806125 (+)	597	WP_004887474.1	6-carboxytetrahydropterin synthase	-
ABLC00_RS08375 (ABLC00_08375)	ung	1806176..1806889 (+)	714	WP_002049829.1	uracil-DNA glycosylase	-
ABLC00_RS08380 (ABLC00_08380)	-	1806886..1808010 (+)	1125	WP_006580787.1	enoyl-CoA hydratase/isomerase family protein	-
ABLC00_RS08385 (ABLC00_08385)	tadA	1808017..1808520 (+)	504	WP_006580788.1	tRNA adenosine(34) deaminase TadA	-
ABLC00_RS08390 (ABLC00_08390)	-	1808590..1809030 (+)	441	WP_002050033.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30797.22 Da
• Isoelectric Point: 9.9903

>NTDB_id=1006806 ABLC00_RS08360 WP_033846335.1 1803525..1804340(+) (xcpW) [Acinetobacter nosocomialis strain XH1679]
MIKNKNFRIQSIASHLRAQSGVIPTDYSGHSSSSYAQTKLRFREPHTRNMVSRLAARSSNARLTRALGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDSLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDQTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQSNLSLSPQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=1006806 ABLC00_RS08360 WP_033846335.1 1803525..1804340(+) (xcpW) [Acinetobacter nosocomialis strain XH1679]
ATGATAAAAAATAAGAATTTTCGAATTCAAAGCATTGCTTCTCATCTTAGAGCTCAGTCGGGTGTTATTCCGACTGACTA
CTCTGGGCATAGCTCTTCGTCTTACGCTCAGACAAAGCTTCGCTTTAGAGAGCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAATGCTCGATTAACTCGCGCCTTAGGATTTACGTTGGTTGAATTGTTAGTTGCGATTGCTATC
TTTGCGGTCTTATCTTTATTGGGGTGGAAAATTTTCGATTACTTGCTTAAAGTTCGTGACCGTAATGCTGAACATGAAGT
GCATTTGTTTGAGTTACAAGATGCTTATCAACAAATTCTTCGTGATAGTCTGCAAATTATTCCTTTATCTGCAAATCAAG
GTGGCCAACTTCATCCAGCTTTAGAAATTGATAATCAAATTCTGCGTTTTAGCAAAGCAGGTGTAACGGATCCTTTAAAA
CAAGGTTTATCACCGTTTGAACGAATTGAATATCGTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAA
TTTGAATACTTCGAATAATGAGCAACCTTTATCGAGTACCTTGCTAAGTCAGGTTGACCAATATCAGATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAGTGGCCTGAGGTTAATATTGATCAAACAAAGCCTAACGAATTGAAAAAATTACCGAAAGGA
ATAAAAATTCAACTTACTGTAGCAGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAAGTAATTTATCGCTTTCCCC
ACAAGGTGGCTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (66-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	93.363	83.395	0.779