Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FX000_RS21540 Genome accession   NZ_LR698983
Coordinates   4166414..4167208 (-) Length   264 a.a.
NCBI ID   WP_003177960.1    Uniprot ID   A0ABY3FW26
Organism   Bacillus licheniformis isolate MGYG-HGUT-02357     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4161414..4172208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FX000_RS21510 - 4161433..4161591 (-) 159 WP_003177948.1 CxxH/CxxC protein -
  FX000_RS21515 - 4161790..4162272 (-) 483 WP_009330015.1 DUF4234 domain-containing protein -
  FX000_RS21520 - 4162703..4163221 (-) 519 WP_011201784.1 GNAT family N-acetyltransferase -
  FX000_RS21525 - 4163252..4163722 (-) 471 WP_003177954.1 membrane protein -
  FX000_RS21530 - 4163978..4164823 (-) 846 WP_016886319.1 S-adenosyl-l-methionine hydroxide adenosyltransferase family protein -
  FX000_RS21535 htrA 4165120..4166331 (-) 1212 WP_003177958.1 S1C family serine protease Regulator
  FX000_RS21540 vicX 4166414..4167208 (-) 795 WP_003177960.1 MBL fold metallo-hydrolase Regulator
  FX000_RS21545 - 4167223..4168071 (-) 849 WP_003177962.1 two-component system regulatory protein YycI -
  FX000_RS21550 - 4168058..4169422 (-) 1365 WP_003177963.1 YycH family regulatory protein -
  FX000_RS21555 walK 4169412..4171256 (-) 1845 WP_003177965.1 cell wall metabolism sensor histidine kinase WalK -
  FX000_RS21560 walR 4171264..4171971 (-) 708 WP_003177967.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29219.18 Da        Isoelectric Point: 5.7678

>NTDB_id=1006715 FX000_RS21540 WP_003177960.1 4166414..4167208(-) (vicX) [Bacillus licheniformis isolate MGYG-HGUT-02357]
MSLQFSVLASGSTGNALYLETDDHAFLVDAGLSGKAMEGLMAQIDRKLDQLDGIFVTHEHSDHIKGLGVLARKYELPVYA
NEKTWKAMEGHIGKMDNGQKFVFPMETVKSFGSLDVESFGVSHDAAEPMFYVFHYNGRKLALITDTGYVSDRMKGIIRSA
NAFVFESNHDVGMLQMGRYPWNIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFAAGETFDLYDTDPKKPTPLVAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1006715 FX000_RS21540 WP_003177960.1 4166414..4167208(-) (vicX) [Bacillus licheniformis isolate MGYG-HGUT-02357]
ATGAGCCTGCAATTTAGCGTACTTGCGAGCGGGAGTACCGGTAATGCTTTATATTTGGAAACCGATGACCACGCTTTTTT
AGTTGACGCAGGACTTAGCGGGAAGGCGATGGAAGGGCTGATGGCGCAAATTGATCGAAAGCTTGATCAGCTCGACGGCA
TCTTTGTTACACATGAGCACAGTGACCATATAAAAGGGCTTGGCGTGCTGGCAAGAAAATATGAGCTGCCCGTTTACGCC
AATGAAAAAACGTGGAAGGCGATGGAAGGGCATATCGGCAAAATGGATAACGGCCAAAAGTTCGTTTTTCCAATGGAAAC
CGTCAAGTCATTCGGCTCCCTTGATGTCGAATCGTTCGGGGTATCCCATGATGCCGCAGAGCCGATGTTTTACGTTTTTC
ATTACAATGGCCGAAAGCTCGCTTTGATTACGGATACGGGCTATGTCAGCGACAGAATGAAAGGCATCATCCGCTCGGCA
AACGCTTTTGTTTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGCCGCTATCCGTGGAACATCAAGCGCCGGAT
TCTAAGCGACGTCGGACACGTATCCAATGAGGACGCGGCACTCGCAATGACCGATGTAATCGGCGATGAGACATCGAGAA
TTTATTTGGCTCATTTAAGCCAGGACAACAACATGAAAGAGCTGGCGAGAATGTCTGTGCAGCAAACGCTGGCTGCCAAA
GGATTTGCGGCAGGAGAAACGTTTGACTTATATGATACCGATCCTAAGAAACCGACGCCTCTCGTAGCGGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.053

99.242

0.527