Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   FX000_RS16830 Genome accession   NZ_LR698983
Coordinates   3213135..3214004 (-) Length   289 a.a.
NCBI ID   WP_011198252.1    Uniprot ID   Q8VQ63
Organism   Bacillus licheniformis isolate MGYG-HGUT-02357     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3208135..3219004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FX000_RS16795 - 3208306..3208782 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  FX000_RS16800 - 3208782..3209066 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  FX000_RS16805 mnhG 3209050..3209424 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  FX000_RS16810 - 3209464..3209853 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  FX000_RS16815 comA 3209870..3210508 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  FX000_RS16820 comP 3210595..3212916 (-) 2322 WP_026080865.1 ATP-binding protein Regulator
  FX000_RS16825 comX 3212956..3213120 (-) 165 WP_011198251.1 competence pheromone ComX -
  FX000_RS16830 comQ 3213135..3214004 (-) 870 WP_011198252.1 polyprenyl synthetase family protein Regulator
  FX000_RS16835 degQ 3214193..3214333 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  FX000_RS16845 - 3214819..3215166 (+) 348 WP_009329512.1 hypothetical protein -
  FX000_RS16850 - 3215209..3216429 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  FX000_RS16855 - 3216608..3218077 (-) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  FX000_RS16860 - 3218095..3218646 (-) 552 WP_003184868.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 289 a.a.        Molecular weight: 32743.41 Da        Isoelectric Point: 4.6799

>NTDB_id=1006693 FX000_RS16830 WP_011198252.1 3213135..3214004(-) (comQ) [Bacillus licheniformis isolate MGYG-HGUT-02357]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINRSVAMNAATALYTISIKVIGSVSKEPVFFEKLMEYTLQSMQGQHDDLSNRPATEDECLDMIKRKSGALTALPCVLGA
MLATGKFDPTVEKYAYQLGIASQIENDYKALFYDSKSDIAKKKRTLAYLYLSRKFNQPSIDLLKTFETEDKIADKEIKCY
KEKLKAAGVTQYMYVMNQLAIQKFKKGIGELELGDMEKERLMSTLLNNN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=1006693 FX000_RS16830 WP_011198252.1 3213135..3214004(-) (comQ) [Bacillus licheniformis isolate MGYG-HGUT-02357]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACCGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
AGAACCGGTGTTTTTCGAAAAGCTAATGGAATATACACTTCAATCGATGCAGGGACAGCATGACGATCTCAGCAACCGCC
CTGCCACTGAAGATGAGTGCCTTGACATGATCAAGCGTAAATCCGGGGCGCTGACAGCCTTGCCATGCGTGCTGGGAGCT
ATGCTTGCTACGGGCAAATTTGACCCGACGGTTGAAAAGTACGCCTACCAGCTGGGCATTGCTTCACAAATTGAAAATGA
TTATAAAGCACTTTTTTATGATTCAAAAAGCGATATCGCCAAGAAAAAGCGGACGCTTGCGTATTTATATTTGTCAAGAA
AATTTAACCAGCCGTCGATTGATTTGTTAAAAACATTTGAAACTGAGGATAAAATTGCCGATAAAGAAATAAAATGCTAT
AAAGAGAAATTGAAGGCAGCAGGCGTCACTCAGTATATGTATGTTATGAATCAGCTCGCTATTCAGAAATTTAAGAAGGG
AATCGGGGAGCTTGAGTTGGGGGATATGGAGAAAGAACGTTTGATGTCTACCCTGCTGAATAACAATTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(41-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8VQ63

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.361

100

0.457

Multiple sequence alignment