Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   ABKJ37_RS07230 Genome accession   NZ_CP157386
Coordinates   1546707..1548548 (+) Length   613 a.a.
NCBI ID   WP_348922644.1    Uniprot ID   -
Organism   Enterococcus rotai strain CMTB-CA6     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1541707..1553548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKJ37_RS07215 - 1542492..1543493 (+) 1002 WP_348922639.1 alpha/beta hydrolase -
  ABKJ37_RS07220 - 1543863..1544309 (+) 447 WP_348922641.1 transcriptional regulator -
  ABKJ37_RS07225 - 1544309..1546690 (+) 2382 WP_348922642.1 ABC transporter ATP-binding protein -
  ABKJ37_RS07230 rcrQ 1546707..1548548 (+) 1842 WP_348922644.1 ABC transporter ATP-binding protein Regulator
  ABKJ37_RS07235 - 1549242..1550822 (+) 1581 WP_348922646.1 phosphatase PAP2/LCP family protein -
  ABKJ37_RS07240 - 1550917..1551891 (+) 975 WP_348922648.1 diaminopimelate dehydrogenase -
  ABKJ37_RS07245 nrdI 1552129..1552581 (-) 453 WP_348922650.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  ABKJ37_RS07250 - 1552802..1553263 (+) 462 WP_348922652.1 phage tail protein -

Sequence


Protein


Download         Length: 613 a.a.        Molecular weight: 68083.64 Da        Isoelectric Point: 6.1435

>NTDB_id=1006564 ABKJ37_RS07230 WP_348922644.1 1546707..1548548(+) (rcrQ) [Enterococcus rotai strain CMTB-CA6]
MAEQKQNRPRGGRGPGQGAPVEKAKDFKGTLKKLISYIGAYKIPVFFVMIFAIASTVFNIWGPKILSSAITELFDGLIKK
YQGTGGIDFNKIGGILLFMLGLYLVASAFGIIQGWIMSTISQKITYRMRKEISEKINRMPMNYFESRTTGEVLSRITNDV
DTLGQSLNQSITQLITSVFTIIGVIVMMLSISVQMTGIAILIVPISMILIMIVVKNSQKYFKTQQEYLGVINGKVEETIG
GYNIVRLFNDEENSLKEFKTQNDVLFKSAWKSQFLSGLMQPIMNFVGNLGYVAVAIFGGILAYNGTITVGDIQAFIQYVR
NLTQPIAQLAQVSNLLQSMAAAAERVFEFLEEDEEAQTVPNPVKIDKAKGMVDFEHVRFGYTPDKIIINDFSSHVDPGQT
VAIVGPTGAGKTTMVKLLMRFYDVTSGAIKIDGHNIKDFNRADLRKNIGMVLQDTWLFKGTIMENLRYGRLDATDEEVYE
AAKAAHVHHFIQTLPGGYNMELNEESSNISQGQKQLLTIARAILADKPILILDEATSSVDTRTEGLIQGAMNNLMAGRTS
FVIAHRLSTIKDADKILYMQDGDIKEQGTHEELLAEGGYYASLYNSQFEELDE

Nucleotide


Download         Length: 1842 bp        

>NTDB_id=1006564 ABKJ37_RS07230 WP_348922644.1 1546707..1548548(+) (rcrQ) [Enterococcus rotai strain CMTB-CA6]
ATGGCAGAACAAAAACAAAATCGCCCTCGTGGCGGACGTGGACCTGGACAAGGCGCTCCAGTAGAGAAAGCCAAAGATTT
TAAAGGAACATTAAAAAAATTAATCTCCTATATTGGTGCTTATAAAATACCTGTTTTCTTTGTAATGATCTTTGCAATTG
CTTCAACAGTCTTCAATATTTGGGGACCAAAAATCTTATCTAGTGCTATTACAGAATTATTTGATGGCTTGATCAAAAAA
TATCAGGGAACTGGCGGGATCGATTTTAATAAAATCGGCGGAATTTTACTATTCATGCTAGGACTGTACTTGGTGGCATC
TGCTTTTGGGATCATCCAAGGCTGGATCATGTCAACGATTTCGCAAAAAATCACGTATCGGATGCGGAAAGAAATTTCAG
AAAAAATCAATCGCATGCCAATGAATTATTTTGAAAGTCGGACAACCGGTGAAGTATTGTCACGAATCACCAATGACGTA
GATACCTTAGGCCAATCGCTAAACCAATCGATCACACAACTGATCACTTCCGTATTCACGATCATCGGGGTTATCGTCAT
GATGTTATCGATCTCAGTACAAATGACAGGTATAGCTATTTTGATCGTACCTATTTCGATGATTTTGATTATGATCGTTG
TAAAAAATTCACAAAAATATTTTAAAACACAACAAGAATACCTTGGTGTAATCAATGGTAAAGTGGAAGAAACAATTGGC
GGTTACAATATCGTCCGTCTATTCAACGATGAAGAAAATTCCTTAAAAGAATTTAAAACGCAAAATGATGTTTTATTCAA
ATCGGCTTGGAAGTCTCAATTTCTTTCTGGTTTGATGCAACCAATTATGAACTTTGTTGGAAATCTAGGCTATGTTGCTG
TTGCGATCTTCGGTGGAATTTTAGCCTATAATGGTACGATCACAGTTGGAGATATCCAAGCATTTATCCAATATGTCCGT
AACTTAACACAACCTATTGCGCAATTAGCTCAAGTATCTAACTTACTTCAATCAATGGCTGCGGCTGCAGAACGCGTCTT
TGAATTTCTTGAAGAAGATGAAGAAGCACAAACTGTACCAAATCCAGTTAAAATCGATAAAGCCAAAGGTATGGTTGATT
TTGAACACGTACGTTTTGGTTACACACCAGATAAAATCATTATCAACGATTTCAGTTCACATGTTGATCCAGGCCAAACG
GTAGCGATCGTTGGACCAACGGGAGCTGGTAAAACGACGATGGTCAAATTATTGATGCGTTTTTATGATGTAACATCTGG
AGCGATTAAAATCGATGGACACAATATTAAAGACTTCAATCGTGCAGATTTACGTAAAAATATCGGAATGGTTTTACAAG
ATACGTGGTTATTTAAAGGAACCATTATGGAAAACCTCCGTTATGGTCGTTTAGATGCAACAGACGAAGAAGTTTACGAA
GCAGCAAAAGCGGCTCACGTACATCACTTTATTCAAACCTTGCCTGGCGGCTACAACATGGAATTAAATGAAGAATCTTC
CAATATTTCGCAAGGTCAAAAACAACTATTAACAATTGCTCGTGCAATTTTAGCAGATAAACCAATTTTGATCCTTGATG
AAGCAACATCATCGGTTGATACAAGAACAGAAGGATTGATCCAAGGCGCAATGAACAACTTAATGGCAGGTCGTACGTCA
TTCGTTATCGCTCACCGTTTATCAACTATCAAAGATGCAGATAAGATTCTTTACATGCAAGATGGCGATATTAAAGAACA
AGGAACACATGAAGAATTACTCGCTGAGGGTGGCTATTATGCCTCACTTTACAACTCACAATTTGAAGAGTTGGATGAGT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

50.943

95.106

0.484


Multiple sequence alignment