Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | ABKJ37_RS06115 | Genome accession | NZ_CP157386 |
| Coordinates | 1307838..1309655 (+) | Length | 605 a.a. |
| NCBI ID | WP_348922360.1 | Uniprot ID | - |
| Organism | Enterococcus rotai strain CMTB-CA6 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1302838..1314655
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABKJ37_RS06095 | trpS | 1303832..1304848 (-) | 1017 | WP_348922358.1 | tryptophan--tRNA ligase | - |
| ABKJ37_RS06100 | spxA | 1305213..1305611 (+) | 399 | WP_010760718.1 | transcriptional regulator SpxA | - |
| ABKJ37_RS06105 | - | 1305868..1306518 (+) | 651 | WP_208928164.1 | adaptor protein MecA | - |
| ABKJ37_RS06110 | - | 1306611..1307801 (+) | 1191 | WP_348922359.1 | competence protein CoiA family protein | - |
| ABKJ37_RS06115 | pepF | 1307838..1309655 (+) | 1818 | WP_348922360.1 | oligoendopeptidase F | Regulator |
| ABKJ37_RS06120 | - | 1309712..1310362 (-) | 651 | WP_208928161.1 | ClpXP adapter SpxH family protein | - |
| ABKJ37_RS06125 | - | 1310480..1311064 (-) | 585 | WP_348922361.1 | CYTH domain-containing protein | - |
| ABKJ37_RS06130 | - | 1311259..1311939 (+) | 681 | WP_208928159.1 | GTP pyrophosphokinase family protein | - |
| ABKJ37_RS06135 | - | 1311951..1312748 (+) | 798 | WP_208928158.1 | NAD kinase | - |
| ABKJ37_RS06140 | - | 1312756..1313649 (+) | 894 | WP_348922362.1 | RluA family pseudouridine synthase | - |
Sequence
Protein
Download Length: 605 a.a. Molecular weight: 69380.62 Da Isoelectric Point: 4.7500
>NTDB_id=1006562 ABKJ37_RS06115 WP_348922360.1 1307838..1309655(+) (pepF) [Enterococcus rotai strain CMTB-CA6]
MSEAKQLPERSSLPVEKTWDLTKIFKDDQAFDEAFQALSDELKKVEQFKGSLDKGSDAFLGSIEMLLAIYRKVEVIYVYA
HLKNDQDTTNTTYQALYARASSLLAQASESVAWFEPEVLSLDDERIWGYFDENPKLATYRHFIETILNERPHILSADQEA
LLAGAGEIFEASSNTFSILNNADLKFPVIENENGEKIQLTHGVYGQLMENTHRSVREEAFKGLYSVYEQFKNTFAQTLSS
HVKAHNYKAKVRNYSSARAAALSNNHIPESVYDTLVDVVNHNLPLLHRYVSLRKRLLKVDELHMYDMYTPILGEASIKYS
YDEAKAKALTALKPMGEEYLTVVQSAFNDRWIDVIENQGKRSGAYSSGSYDTAPYILMNWHDSLDQLYTLVHEMGHSVHS
YFTRSNQPYVYGDYSIFLAEIASTTNENLLTEYLLETETDPRIRAYVLNHYLDGFKGTIFRQTQFAEFEHFIHTEDAKGT
PLTSEYLGEYYGDLNQKYYGPDVKKDPEISLEWSRIPHFYYNYYVYQYATGFSAASALANKILANEPSALENYLTYLKSG
SSDYPIEVMKKAGVDMTKPEYIEDAMTVFEARLNELEQLIESLEQ
MSEAKQLPERSSLPVEKTWDLTKIFKDDQAFDEAFQALSDELKKVEQFKGSLDKGSDAFLGSIEMLLAIYRKVEVIYVYA
HLKNDQDTTNTTYQALYARASSLLAQASESVAWFEPEVLSLDDERIWGYFDENPKLATYRHFIETILNERPHILSADQEA
LLAGAGEIFEASSNTFSILNNADLKFPVIENENGEKIQLTHGVYGQLMENTHRSVREEAFKGLYSVYEQFKNTFAQTLSS
HVKAHNYKAKVRNYSSARAAALSNNHIPESVYDTLVDVVNHNLPLLHRYVSLRKRLLKVDELHMYDMYTPILGEASIKYS
YDEAKAKALTALKPMGEEYLTVVQSAFNDRWIDVIENQGKRSGAYSSGSYDTAPYILMNWHDSLDQLYTLVHEMGHSVHS
YFTRSNQPYVYGDYSIFLAEIASTTNENLLTEYLLETETDPRIRAYVLNHYLDGFKGTIFRQTQFAEFEHFIHTEDAKGT
PLTSEYLGEYYGDLNQKYYGPDVKKDPEISLEWSRIPHFYYNYYVYQYATGFSAASALANKILANEPSALENYLTYLKSG
SSDYPIEVMKKAGVDMTKPEYIEDAMTVFEARLNELEQLIESLEQ
Nucleotide
Download Length: 1818 bp
>NTDB_id=1006562 ABKJ37_RS06115 WP_348922360.1 1307838..1309655(+) (pepF) [Enterococcus rotai strain CMTB-CA6]
ATGAGTGAAGCAAAACAATTACCAGAACGTTCAAGTTTACCAGTAGAAAAAACGTGGGACTTAACGAAAATTTTTAAGGA
TGATCAAGCTTTTGATGAGGCATTTCAAGCTTTATCTGATGAGTTAAAAAAAGTTGAACAGTTTAAGGGATCTTTAGATA
AAGGCAGTGATGCATTTCTAGGCAGTATTGAAATGTTATTAGCGATTTATCGTAAAGTCGAAGTCATTTATGTTTATGCT
CATTTAAAAAATGACCAAGATACGACGAATACAACGTATCAAGCACTTTATGCTAGAGCAAGCTCTTTATTAGCACAGGC
TAGTGAATCAGTTGCTTGGTTTGAACCAGAAGTATTATCGTTGGATGACGAGAGAATTTGGGGTTATTTTGATGAAAATC
CTAAATTGGCAACTTATCGACATTTTATTGAAACTATTTTAAATGAACGTCCGCATATCTTGTCTGCTGATCAAGAAGCT
TTATTGGCTGGTGCAGGAGAAATTTTTGAAGCGTCTAGTAATACGTTCTCCATCTTGAACAATGCCGATTTAAAATTTCC
AGTTATCGAAAATGAAAATGGTGAGAAGATCCAATTGACACACGGTGTCTATGGACAATTGATGGAAAATACCCATAGAA
GCGTCCGTGAAGAAGCATTTAAAGGACTCTATAGCGTTTATGAACAGTTTAAGAATACATTTGCACAAACGTTAAGTTCA
CATGTCAAAGCGCATAACTATAAAGCAAAAGTTCGCAACTATTCCTCAGCGAGAGCAGCAGCACTAAGTAACAACCATAT
TCCTGAAAGTGTTTATGATACATTGGTGGACGTAGTAAACCATAATTTACCATTGCTGCATCGTTATGTGTCTTTACGTA
AACGTCTATTGAAAGTGGACGAACTGCACATGTATGATATGTATACGCCTATTTTAGGAGAAGCATCGATCAAGTATTCT
TATGATGAAGCAAAAGCAAAAGCGCTCACTGCATTGAAACCTATGGGAGAAGAATACCTAACGGTTGTTCAGTCCGCTTT
TAATGATCGATGGATCGATGTTATTGAAAACCAAGGAAAACGTAGTGGAGCATATTCATCAGGGTCATATGATACAGCGC
CATATATCTTAATGAATTGGCATGATAGTTTGGATCAACTATATACTTTAGTTCATGAAATGGGACATAGTGTTCATAGC
TATTTTACTCGAAGCAATCAGCCATATGTTTATGGCGACTATTCAATTTTTCTAGCTGAGATAGCATCTACGACAAATGA
AAATCTATTGACCGAATATCTATTGGAGACTGAGACAGATCCCCGAATTCGTGCGTATGTCTTGAATCATTATTTGGATG
GTTTCAAAGGAACGATTTTCCGTCAAACACAATTTGCTGAATTCGAGCATTTTATTCATACCGAAGATGCTAAAGGAACA
CCTCTAACGAGTGAATATCTAGGTGAGTATTATGGAGATCTGAATCAGAAATATTATGGACCTGATGTTAAGAAAGATCC
CGAAATTTCATTAGAGTGGTCTCGTATCCCTCATTTTTATTACAATTATTATGTCTATCAATATGCTACAGGTTTTTCAG
CAGCATCAGCGCTAGCAAATAAAATATTAGCAAACGAGCCCTCAGCTTTAGAAAATTATTTAACGTATCTGAAGTCTGGA
AGTAGTGATTATCCAATCGAGGTAATGAAAAAAGCTGGAGTAGATATGACAAAACCAGAGTATATCGAAGATGCGATGAC
AGTTTTTGAAGCGAGATTAAATGAATTAGAACAACTTATAGAATCTTTAGAGCAATAA
ATGAGTGAAGCAAAACAATTACCAGAACGTTCAAGTTTACCAGTAGAAAAAACGTGGGACTTAACGAAAATTTTTAAGGA
TGATCAAGCTTTTGATGAGGCATTTCAAGCTTTATCTGATGAGTTAAAAAAAGTTGAACAGTTTAAGGGATCTTTAGATA
AAGGCAGTGATGCATTTCTAGGCAGTATTGAAATGTTATTAGCGATTTATCGTAAAGTCGAAGTCATTTATGTTTATGCT
CATTTAAAAAATGACCAAGATACGACGAATACAACGTATCAAGCACTTTATGCTAGAGCAAGCTCTTTATTAGCACAGGC
TAGTGAATCAGTTGCTTGGTTTGAACCAGAAGTATTATCGTTGGATGACGAGAGAATTTGGGGTTATTTTGATGAAAATC
CTAAATTGGCAACTTATCGACATTTTATTGAAACTATTTTAAATGAACGTCCGCATATCTTGTCTGCTGATCAAGAAGCT
TTATTGGCTGGTGCAGGAGAAATTTTTGAAGCGTCTAGTAATACGTTCTCCATCTTGAACAATGCCGATTTAAAATTTCC
AGTTATCGAAAATGAAAATGGTGAGAAGATCCAATTGACACACGGTGTCTATGGACAATTGATGGAAAATACCCATAGAA
GCGTCCGTGAAGAAGCATTTAAAGGACTCTATAGCGTTTATGAACAGTTTAAGAATACATTTGCACAAACGTTAAGTTCA
CATGTCAAAGCGCATAACTATAAAGCAAAAGTTCGCAACTATTCCTCAGCGAGAGCAGCAGCACTAAGTAACAACCATAT
TCCTGAAAGTGTTTATGATACATTGGTGGACGTAGTAAACCATAATTTACCATTGCTGCATCGTTATGTGTCTTTACGTA
AACGTCTATTGAAAGTGGACGAACTGCACATGTATGATATGTATACGCCTATTTTAGGAGAAGCATCGATCAAGTATTCT
TATGATGAAGCAAAAGCAAAAGCGCTCACTGCATTGAAACCTATGGGAGAAGAATACCTAACGGTTGTTCAGTCCGCTTT
TAATGATCGATGGATCGATGTTATTGAAAACCAAGGAAAACGTAGTGGAGCATATTCATCAGGGTCATATGATACAGCGC
CATATATCTTAATGAATTGGCATGATAGTTTGGATCAACTATATACTTTAGTTCATGAAATGGGACATAGTGTTCATAGC
TATTTTACTCGAAGCAATCAGCCATATGTTTATGGCGACTATTCAATTTTTCTAGCTGAGATAGCATCTACGACAAATGA
AAATCTATTGACCGAATATCTATTGGAGACTGAGACAGATCCCCGAATTCGTGCGTATGTCTTGAATCATTATTTGGATG
GTTTCAAAGGAACGATTTTCCGTCAAACACAATTTGCTGAATTCGAGCATTTTATTCATACCGAAGATGCTAAAGGAACA
CCTCTAACGAGTGAATATCTAGGTGAGTATTATGGAGATCTGAATCAGAAATATTATGGACCTGATGTTAAGAAAGATCC
CGAAATTTCATTAGAGTGGTCTCGTATCCCTCATTTTTATTACAATTATTATGTCTATCAATATGCTACAGGTTTTTCAG
CAGCATCAGCGCTAGCAAATAAAATATTAGCAAACGAGCCCTCAGCTTTAGAAAATTATTTAACGTATCTGAAGTCTGGA
AGTAGTGATTATCCAATCGAGGTAATGAAAAAAGCTGGAGTAGATATGACAAAACCAGAGTATATCGAAGATGCGATGAC
AGTTTTTGAAGCGAGATTAAATGAATTAGAACAACTTATAGAATCTTTAGAGCAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
54.223 |
97.851 |
0.531 |