Detailed information    

insolico Bioinformatically predicted

Overview

Name   hexA   Type   Machinery gene
Locus tag   FQT45_RS10125 Genome accession   NZ_LR595858
Coordinates   2063044..2065593 (-) Length   849 a.a.
NCBI ID   WP_077323217.1    Uniprot ID   -
Organism   Streptococcus pseudoporcinus strain NCTC10228     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2058044..2070593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT45_RS10120 (NCTC10228_02087) - 2059764..2062652 (+) 2889 WP_223837125.1 serum opacification factor -
  FQT45_RS10125 (NCTC10228_02088) hexA 2063044..2065593 (-) 2550 WP_077323217.1 DNA mismatch repair protein MutS Machinery gene
  FQT45_RS10130 (NCTC10228_02089) - 2065580..2065933 (-) 354 WP_077323218.1 YlbF family regulator -
  FQT45_RS10135 (NCTC10228_02090) argR 2065930..2066367 (-) 438 WP_077323219.1 arginine repressor -
  FQT45_RS10140 (NCTC10228_02091) argS 2066655..2068343 (+) 1689 WP_077323220.1 arginine--tRNA ligase -
  FQT45_RS10145 (NCTC10228_02092) - 2068389..2069270 (-) 882 WP_007893764.1 YitT family protein -
  FQT45_RS10150 (NCTC10228_02093) - 2069322..2070206 (-) 885 WP_007893787.1 YitT family protein -

Sequence

Protein


Download         Length: 849 a.a.        Molecular weight: 94904.08 Da        Isoelectric Point: 4.9750

>NTDB_id=1006441 FQT45_RS10125 WP_077323217.1 2063044..2065593(-) (hexA) [Streptococcus pseudoporcinus strain NCTC10228]
MTNPKISPGMQQYLDIKANYPDAFLLFRMGDFYELFYEDAVKAAQLLEIGLTSRNKNAENPIPMAGVPHHSAQQYIDVLI
EMGYKVAIAEQMEDPKKAVGVVKREVVQVITPGTVVDSAKPSTANNFLVAIDHDGQDYGLSYMDLATGEFFVTSLTDFTN
LSSEILNLKAKEVILGFELDEDQEKQLKQDSNLLLSYSDSCCENSDLLSPQLTSIELRVAGKLLAYVHQTQMRELSHLQK
VSHYEIKDYLQMTYSTKASLDLLENACTGKKHGSLYWLLDETKTAMGMRLLRTWIDRPLIHQAAIEKRQRIIQTFLDNFI
ERADLSDSLKGVYDIERLSSRVSFGKVNPKDLLQLGQTLARVPYIKAVLESMTSTDLGELVDQIDTIPELENLIRSAIDP
EAQATISEGNIIRTGFDERLDHYRKVMKEGTGWIADIEGKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPDHFFRKA
TLKNSERYGTAELAKIEGQMLEAREESAQLEYDIFMRVRAQVETYIARLQSLAKAIATVDVLQSLAHVAEQNHYVCPRFN
QDKEVRIVDGRHAVVEKVMGVREYIPNSIHLTDQVSIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVSADQANLPLFDA
IFTRIGAADDLISGQSTFMVEMMEANQAIQRASQNSLILFDELGRGTATYDGMALAQSIIEYIHDRVGAKTLFATHYHEL
TALSSQLEGLQNVHVATLERGGEVTFLHKISEGPADKSYGIHVAKIAGLPEGLLSRAGHILEELEGDSKRVTLANTSAVV
SQETSGNQQLDLLSSEANEVIVDKLKAIDIMNLTPMEAMTILYDLKKEL

Nucleotide


Download         Length: 2550 bp        

>NTDB_id=1006441 FQT45_RS10125 WP_077323217.1 2063044..2065593(-) (hexA) [Streptococcus pseudoporcinus strain NCTC10228]
ATGACCAATCCTAAAATTTCTCCCGGAATGCAACAGTATCTGGACATTAAAGCCAATTATCCAGATGCTTTTTTGCTTTT
TAGGATGGGAGATTTTTACGAACTATTTTATGAAGATGCAGTAAAAGCTGCACAGTTATTAGAAATTGGTTTAACCAGTC
GCAATAAAAATGCTGAAAATCCTATTCCCATGGCAGGAGTGCCCCATCATTCAGCCCAACAATATATTGATGTTCTCATT
GAAATGGGTTATAAGGTTGCAATTGCTGAACAGATGGAAGACCCTAAAAAAGCAGTCGGGGTGGTCAAACGTGAAGTTGT
TCAAGTTATCACTCCTGGGACAGTTGTTGATTCAGCTAAACCAAGTACAGCTAATAACTTTTTGGTTGCTATCGATCATG
ATGGACAGGATTATGGTTTGTCCTATATGGATTTGGCAACAGGAGAATTCTTTGTAACGAGTCTGACTGACTTTACAAAC
CTTAGCAGTGAAATCCTAAATTTAAAAGCTAAAGAAGTTATTCTTGGTTTTGAACTGGATGAAGATCAAGAAAAGCAATT
AAAGCAAGACAGCAACTTGCTTTTATCCTATAGTGATAGTTGCTGCGAAAATTCTGATCTACTAAGTCCGCAACTGACTT
CAATTGAACTTAGGGTGGCAGGGAAGCTGTTGGCTTATGTTCATCAAACCCAAATGCGAGAACTCTCGCATCTACAAAAA
GTTAGCCATTACGAGATTAAAGACTATCTGCAGATGACTTATAGTACAAAAGCCAGCTTAGATTTGCTTGAAAATGCTTG
TACGGGTAAAAAACACGGGAGTCTTTACTGGCTGTTGGATGAGACGAAGACGGCTATGGGAATGCGGTTATTACGAACTT
GGATAGATCGTCCGCTCATTCATCAGGCGGCCATTGAAAAAAGGCAAAGAATTATCCAGACCTTCCTTGATAATTTTATC
GAGCGAGCTGATTTAAGTGATAGTTTAAAAGGGGTCTATGATATTGAGCGCCTGTCCAGCCGAGTTTCCTTTGGTAAGGT
CAACCCAAAAGACCTTCTTCAATTAGGTCAAACATTAGCCCGAGTTCCTTATATTAAGGCTGTTTTAGAGTCTATGACCA
GCACAGATTTAGGAGAGCTAGTCGATCAAATTGATACCATTCCAGAACTGGAAAACCTTATTCGCTCAGCTATTGACCCA
GAGGCTCAAGCCACCATTAGTGAAGGTAATATTATAAGGACCGGCTTTGATGAGCGCTTGGATCATTACCGAAAAGTGAT
GAAAGAAGGGACGGGTTGGATTGCTGATATTGAAGGCAAGGAACGCCAAGCCAGTGGTATCAATAATTTAAAAATTGATT
ACAACAAAAAAGACGGTTACTATTTCCATGTGACAAACTCTAATTTATCACTAGTTCCAGACCATTTCTTTAGAAAAGCA
ACGCTGAAAAACTCAGAACGATATGGCACAGCAGAACTCGCTAAGATTGAAGGACAGATGTTAGAGGCGCGTGAAGAATC
AGCTCAATTAGAGTATGATATTTTCATGAGGGTTCGAGCACAGGTGGAGACTTATATTGCGCGATTGCAGAGCTTAGCCA
AAGCCATTGCAACTGTAGATGTCTTGCAAAGCCTAGCGCACGTTGCAGAGCAGAACCACTACGTTTGTCCTCGCTTTAAT
CAAGATAAAGAGGTGAGGATTGTAGATGGTCGTCATGCAGTTGTTGAAAAAGTAATGGGTGTCCGGGAATATATTCCAAA
CAGTATTCACTTGACAGACCAGGTTTCTATTCAGTTAATCACTGGACCAAATATGAGTGGTAAGTCGACCTATATGCGTC
AACTTGCCTTGACTGTTATCATGGCCCAAATGGGTTCTTACGTATCTGCAGATCAGGCTAATCTCCCATTATTTGACGCT
ATCTTTACTCGAATAGGAGCCGCAGATGACTTGATTTCTGGTCAGTCAACCTTTATGGTGGAAATGATGGAAGCTAATCA
AGCTATCCAGCGTGCTAGTCAAAACTCACTTATTCTATTTGATGAGCTTGGAAGGGGAACAGCAACCTATGATGGCATGG
CCTTGGCTCAATCAATCATAGAGTATATTCATGATCGTGTTGGTGCTAAAACGCTGTTTGCAACGCATTACCATGAGTTG
ACAGCACTATCAAGTCAACTGGAAGGTCTACAAAATGTCCATGTGGCGACCTTGGAAAGAGGAGGAGAAGTGACTTTTTT
ACATAAGATTTCTGAAGGCCCTGCGGACAAGTCTTATGGTATCCACGTTGCTAAAATTGCAGGCCTCCCAGAAGGATTAC
TTTCAAGGGCAGGCCATATTTTAGAAGAATTAGAAGGTGATTCAAAAAGGGTGACCTTAGCCAATACCTCAGCAGTAGTT
TCTCAAGAGACGAGTGGTAATCAACAACTTGATTTGTTGTCAAGCGAGGCTAACGAGGTTATTGTTGACAAGCTTAAGGC
AATTGATATCATGAATCTGACTCCTATGGAAGCAATGACCATTCTTTATGACTTAAAAAAAGAATTATAA

Domains

Predicted by InterProScan.

MutS domain I (MutS_I)

(8-118)

MutS domain V (MutS_V)

(599-785)

MutS domain III (MutS_III)

(256-546)

MutS family domain IV (MutS_IV)

(415-506)

MutS domain II (MutS_II)

(126-187)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexA Streptococcus pneumoniae R6

68.273

100

0.684
  mutS Pseudomonas stutzeri strain ATCC 17587

36.416

100

0.376