Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | FQT45_RS05085 | Genome accession | NZ_LR595858 |
| Coordinates | 1037467..1039566 (-) | Length | 699 a.a. |
| NCBI ID | WP_077323602.1 | Uniprot ID | - |
| Organism | Streptococcus pseudoporcinus strain NCTC10228 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1032467..1044566
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FQT45_RS05055 (NCTC10228_01039) | - | 1032895..1033734 (+) | 840 | WP_077323600.1 | thymidylate synthase | - |
| FQT45_RS05060 (NCTC10228_01040) | - | 1033814..1034311 (+) | 498 | WP_007894152.1 | dihydrofolate reductase | - |
| FQT45_RS05065 (NCTC10228_01041) | - | 1034336..1034506 (+) | 171 | WP_003083300.1 | hypothetical protein | - |
| FQT45_RS05070 (NCTC10228_01042) | clpX | 1034537..1035766 (+) | 1230 | WP_037598846.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| FQT45_RS05075 (NCTC10228_01043) | yihA | 1035779..1036378 (+) | 600 | WP_007894077.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| FQT45_RS05080 (NCTC10228_01044) | - | 1036501..1037217 (+) | 717 | WP_077323601.1 | hypothetical protein | - |
| FQT45_RS05085 (NCTC10228_01045) | clpE | 1037467..1039566 (-) | 2100 | WP_077323602.1 | AAA family ATPase | Regulator |
| FQT45_RS05090 (NCTC10228_01047) | rplJ | 1039973..1040473 (+) | 501 | WP_003083012.1 | 50S ribosomal protein L10 | - |
| FQT45_RS05095 (NCTC10228_01048) | rplL | 1040539..1040904 (+) | 366 | WP_007894316.1 | 50S ribosomal protein L7/L12 | - |
| FQT45_RS05100 (NCTC10228_01049) | - | 1041107..1042633 (-) | 1527 | WP_077353901.1 | IS1182 family transposase | - |
| FQT45_RS05105 (NCTC10228_01050) | - | 1043398..1044252 (-) | 855 | WP_077323620.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 699 a.a. Molecular weight: 77410.64 Da Isoelectric Point: 5.6006
>NTDB_id=1006396 FQT45_RS05085 WP_077323602.1 1037467..1039566(-) (clpE) [Streptococcus pseudoporcinus strain NCTC10228]
MTKNYGRDSFGNMDDIFNQLMGNIGGYQTENRRYLVNGREMTPEEFNHYRQTGKIPNQISNETSHSKQQVASNGILEKLG
TNLTEEARKGNLDPVIGRNKEIQDTAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVAGDVPTAIKGKEIISIDISSL
EAGTQYRGSFEENIQQLITEVKESGNIVLFFDEIHQILGAGSTGGESGSKGLADILKPALSRGEITVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPNAEDTFHILMGIRNLYEQHHNVILPDSVLKAAVDYSIQYIPQRSLPDKAIDLLDMTAAHLAA
QHPATDLQSLEKEIETQKKAQEQAVEKEDFEAALKAKTRIEELQKQIENHTEGQKVTANINDIAQSVERLTGIPVSKMGA
SDLERLKEIASRLKAHVIGQDQAVSAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSKESIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNKNTLTEKVRRNPYAIILLDEIEKADSQVITLLLQVLDDGRLTDGQGNTIDFKNT
VIIATSNAGFGYEHNLDKQDKEIPIMDRLAPYFRPEFLNRFNALIEFKSLTKADLKAIVNLMLAEVDKTIVKKGITLEVD
DNVKDHLIELGYDPTMGVRPLRRVIEQEIRDNITDYYLDHPEAKKLHAQLKNGKITITP
MTKNYGRDSFGNMDDIFNQLMGNIGGYQTENRRYLVNGREMTPEEFNHYRQTGKIPNQISNETSHSKQQVASNGILEKLG
TNLTEEARKGNLDPVIGRNKEIQDTAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVAGDVPTAIKGKEIISIDISSL
EAGTQYRGSFEENIQQLITEVKESGNIVLFFDEIHQILGAGSTGGESGSKGLADILKPALSRGEITVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPNAEDTFHILMGIRNLYEQHHNVILPDSVLKAAVDYSIQYIPQRSLPDKAIDLLDMTAAHLAA
QHPATDLQSLEKEIETQKKAQEQAVEKEDFEAALKAKTRIEELQKQIENHTEGQKVTANINDIAQSVERLTGIPVSKMGA
SDLERLKEIASRLKAHVIGQDQAVSAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSKESIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNKNTLTEKVRRNPYAIILLDEIEKADSQVITLLLQVLDDGRLTDGQGNTIDFKNT
VIIATSNAGFGYEHNLDKQDKEIPIMDRLAPYFRPEFLNRFNALIEFKSLTKADLKAIVNLMLAEVDKTIVKKGITLEVD
DNVKDHLIELGYDPTMGVRPLRRVIEQEIRDNITDYYLDHPEAKKLHAQLKNGKITITP
Nucleotide
Download Length: 2100 bp
>NTDB_id=1006396 FQT45_RS05085 WP_077323602.1 1037467..1039566(-) (clpE) [Streptococcus pseudoporcinus strain NCTC10228]
ATGACAAAAAATTATGGAAGAGATTCTTTTGGAAATATGGATGATATTTTCAATCAACTAATGGGAAATATTGGTGGTTA
CCAGACAGAAAATCGTCGCTATTTGGTCAATGGTCGCGAGATGACTCCGGAAGAGTTCAATCACTATCGCCAAACCGGTA
AGATACCAAATCAAATAAGCAATGAAACTAGCCATTCTAAACAACAAGTGGCTAGTAACGGTATTTTGGAAAAATTAGGA
ACCAATCTAACGGAAGAAGCTCGCAAAGGAAATCTAGATCCTGTTATTGGACGCAATAAGGAAATTCAAGATACTGCTGA
AATTCTATCTCGACGAACAAAAAATAATCCTGTTCTTGTTGGTGATGCGGGAGTTGGAAAAACTGCTGTCGTCGAAGGCT
TAGCTCAAGCTATTGTAGCTGGGGATGTCCCAACTGCGATTAAAGGGAAAGAAATCATTTCAATTGATATTTCTAGTCTA
GAAGCAGGCACCCAATACCGTGGTAGTTTTGAAGAAAATATTCAGCAGTTAATTACTGAAGTTAAAGAATCAGGTAATAT
TGTCCTATTCTTTGATGAAATTCACCAAATTTTAGGAGCAGGCTCTACAGGTGGCGAATCTGGATCTAAAGGTTTAGCTG
ATATCCTTAAACCTGCCTTATCACGTGGAGAAATAACAGTTATCGGTGCGACAACTCAAGATGAATATCGAAATACTATC
CTTAAAAATGCTGCTTTAGCAAGACGCTTTAATGAAGTTAAGGTCAATGCTCCAAATGCTGAGGACACTTTCCATATCTT
AATGGGAATACGAAATCTCTATGAACAACATCATAATGTTATTCTTCCCGACTCCGTATTAAAGGCAGCAGTTGATTATT
CTATCCAGTATATTCCACAGCGTAGCCTCCCTGATAAGGCTATTGATTTATTAGATATGACAGCTGCACATTTAGCTGCC
CAACATCCAGCGACAGATCTTCAATCCCTCGAAAAAGAAATTGAAACACAAAAAAAGGCTCAAGAACAGGCTGTAGAAAA
AGAAGATTTTGAAGCAGCTCTCAAAGCAAAAACTAGAATTGAAGAATTGCAAAAACAGATTGAAAACCATACAGAAGGTC
AAAAAGTGACTGCCAATATTAATGACATCGCTCAATCTGTTGAACGACTAACCGGAATCCCTGTTTCCAAGATGGGCGCA
AGTGATTTAGAACGTCTAAAAGAAATTGCTAGCCGCTTAAAAGCACACGTCATCGGTCAAGATCAAGCTGTTTCTGCGGT
TGCAAGAGCTATTCGTCGGAACCGGGCTGGCTTTGATGATGGGAATCGTCCCATTGGATCCTTCTTATTTGTAGGACCGA
CTGGGGTTGGGAAAACTGAACTCGCAAAACAGCTCGCGCTTGATATGTTTGGATCTAAAGAGTCCATTATAAGATTAGAT
ATGTCAGAATACAGTGACCGAACAGCTGTTTCAAAATTAATTGGTACTACTGCTGGTTATGTGGGCTATGATGATAACAA
AAATACCTTAACTGAGAAAGTACGTCGTAATCCCTATGCCATTATCCTTTTGGACGAAATTGAAAAAGCTGACTCACAAG
TTATTACGCTCTTACTTCAAGTTTTAGATGATGGTCGTCTGACAGATGGACAGGGAAATACCATTGACTTCAAAAACACT
GTTATTATTGCCACATCCAATGCTGGATTTGGTTATGAGCATAACCTTGACAAGCAAGACAAAGAAATACCGATCATGGA
CCGACTTGCGCCCTACTTCAGACCAGAATTTCTTAATAGATTCAATGCTCTTATAGAATTCAAGAGTTTGACAAAAGCTG
ATCTGAAAGCTATCGTCAATCTGATGTTAGCCGAAGTTGATAAGACGATTGTAAAAAAAGGAATCACATTAGAAGTAGAT
GACAATGTTAAAGATCACCTAATTGAGCTTGGCTATGATCCAACAATGGGAGTTCGTCCACTTAGACGTGTTATCGAACA
AGAAATTCGTGACAATATTACAGATTACTACTTAGACCATCCTGAAGCCAAAAAACTCCATGCTCAGTTGAAAAATGGAA
AGATTACCATTACTCCATAA
ATGACAAAAAATTATGGAAGAGATTCTTTTGGAAATATGGATGATATTTTCAATCAACTAATGGGAAATATTGGTGGTTA
CCAGACAGAAAATCGTCGCTATTTGGTCAATGGTCGCGAGATGACTCCGGAAGAGTTCAATCACTATCGCCAAACCGGTA
AGATACCAAATCAAATAAGCAATGAAACTAGCCATTCTAAACAACAAGTGGCTAGTAACGGTATTTTGGAAAAATTAGGA
ACCAATCTAACGGAAGAAGCTCGCAAAGGAAATCTAGATCCTGTTATTGGACGCAATAAGGAAATTCAAGATACTGCTGA
AATTCTATCTCGACGAACAAAAAATAATCCTGTTCTTGTTGGTGATGCGGGAGTTGGAAAAACTGCTGTCGTCGAAGGCT
TAGCTCAAGCTATTGTAGCTGGGGATGTCCCAACTGCGATTAAAGGGAAAGAAATCATTTCAATTGATATTTCTAGTCTA
GAAGCAGGCACCCAATACCGTGGTAGTTTTGAAGAAAATATTCAGCAGTTAATTACTGAAGTTAAAGAATCAGGTAATAT
TGTCCTATTCTTTGATGAAATTCACCAAATTTTAGGAGCAGGCTCTACAGGTGGCGAATCTGGATCTAAAGGTTTAGCTG
ATATCCTTAAACCTGCCTTATCACGTGGAGAAATAACAGTTATCGGTGCGACAACTCAAGATGAATATCGAAATACTATC
CTTAAAAATGCTGCTTTAGCAAGACGCTTTAATGAAGTTAAGGTCAATGCTCCAAATGCTGAGGACACTTTCCATATCTT
AATGGGAATACGAAATCTCTATGAACAACATCATAATGTTATTCTTCCCGACTCCGTATTAAAGGCAGCAGTTGATTATT
CTATCCAGTATATTCCACAGCGTAGCCTCCCTGATAAGGCTATTGATTTATTAGATATGACAGCTGCACATTTAGCTGCC
CAACATCCAGCGACAGATCTTCAATCCCTCGAAAAAGAAATTGAAACACAAAAAAAGGCTCAAGAACAGGCTGTAGAAAA
AGAAGATTTTGAAGCAGCTCTCAAAGCAAAAACTAGAATTGAAGAATTGCAAAAACAGATTGAAAACCATACAGAAGGTC
AAAAAGTGACTGCCAATATTAATGACATCGCTCAATCTGTTGAACGACTAACCGGAATCCCTGTTTCCAAGATGGGCGCA
AGTGATTTAGAACGTCTAAAAGAAATTGCTAGCCGCTTAAAAGCACACGTCATCGGTCAAGATCAAGCTGTTTCTGCGGT
TGCAAGAGCTATTCGTCGGAACCGGGCTGGCTTTGATGATGGGAATCGTCCCATTGGATCCTTCTTATTTGTAGGACCGA
CTGGGGTTGGGAAAACTGAACTCGCAAAACAGCTCGCGCTTGATATGTTTGGATCTAAAGAGTCCATTATAAGATTAGAT
ATGTCAGAATACAGTGACCGAACAGCTGTTTCAAAATTAATTGGTACTACTGCTGGTTATGTGGGCTATGATGATAACAA
AAATACCTTAACTGAGAAAGTACGTCGTAATCCCTATGCCATTATCCTTTTGGACGAAATTGAAAAAGCTGACTCACAAG
TTATTACGCTCTTACTTCAAGTTTTAGATGATGGTCGTCTGACAGATGGACAGGGAAATACCATTGACTTCAAAAACACT
GTTATTATTGCCACATCCAATGCTGGATTTGGTTATGAGCATAACCTTGACAAGCAAGACAAAGAAATACCGATCATGGA
CCGACTTGCGCCCTACTTCAGACCAGAATTTCTTAATAGATTCAATGCTCTTATAGAATTCAAGAGTTTGACAAAAGCTG
ATCTGAAAGCTATCGTCAATCTGATGTTAGCCGAAGTTGATAAGACGATTGTAAAAAAAGGAATCACATTAGAAGTAGAT
GACAATGTTAAAGATCACCTAATTGAGCTTGGCTATGATCCAACAATGGGAGTTCGTCCACTTAGACGTGTTATCGAACA
AGAAATTCGTGACAATATTACAGATTACTACTTAGACCATCCTGAAGCCAAAAAACTCCATGCTCAGTTGAAAAATGGAA
AGATTACCATTACTCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
50.702 |
91.702 |
0.465 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.079 |
90.558 |
0.454 |
| clpE | Streptococcus pneumoniae TIGR4 |
50.079 |
90.558 |
0.454 |
| clpE | Streptococcus pneumoniae Rx1 |
50.079 |
90.558 |
0.454 |
| clpE | Streptococcus pneumoniae D39 |
50.079 |
90.558 |
0.454 |
| clpE | Streptococcus pneumoniae R6 |
50.079 |
90.558 |
0.454 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.79 |
91.989 |
0.412 |
| clpC | Streptococcus pneumoniae Rx1 |
42.057 |
94.564 |
0.398 |
| clpC | Streptococcus pneumoniae D39 |
42.057 |
94.564 |
0.398 |
| clpC | Streptococcus mutans UA159 |
42.344 |
91.559 |
0.388 |
| clpC | Streptococcus thermophilus LMD-9 |
43.569 |
88.984 |
0.388 |
| clpC | Streptococcus thermophilus LMG 18311 |
43.408 |
88.984 |
0.386 |
| clpC | Streptococcus pneumoniae TIGR4 |
43.366 |
88.412 |
0.383 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
40.582 |
93.419 |
0.379 |