Detailed information NTG1006380

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: FQT45_RS02945
• Genome accession: NZ_LR595858
• Coordinates: 568204..570417 (+)
• Length: 737 a.a.
• NCBI ID: WP_077322251.1
• Uniprot ID: -
• Organism: Streptococcus pseudoporcinus strain NCTC10228
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 563204..575417

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQT45_RS02920 (NCTC10228_00589)	-	565308..565574 (-)	267	WP_172604970.1	GIY-YIG nuclease family protein	-
FQT45_RS10785 (NCTC10228_00590)	-	565564..565860 (-)	297	WP_077322083.1	DUF3923 family protein	-
FQT45_RS02930 (NCTC10228_00591)	-	565802..566551 (-)	750	WP_077322085.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
FQT45_RS02935 (NCTC10228_00592)	-	566698..567438 (+)	741	WP_077322087.1	lysophospholipid acyltransferase family protein	-
FQT45_RS02940 (NCTC10228_00593)	comEA/celA/cilE	567507..568193 (+)	687	WP_077322089.1	helix-hairpin-helix domain-containing protein	Machinery gene
FQT45_RS02945 (NCTC10228_00594)	comEC/celB	568204..570417 (+)	2214	WP_077322251.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
FQT45_RS02950 (NCTC10228_00595)	holA	570492..571523 (+)	1032	WP_077322091.1	DNA polymerase III subunit delta	-
FQT45_RS02955 (NCTC10228_00596)	sodA	571642..572250 (+)	609	WP_077322093.1	superoxide dismutase SodA	-
FQT45_RS02960 (NCTC10228_00597)	-	572541..573587 (+)	1047	WP_077322095.1	serine hydrolase	-
FQT45_RS02965 (NCTC10228_00598)	queA	573791..574819 (-)	1029	WP_077322097.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 85056.05 Da
• Isoelectric Point: 9.6986

>NTDB_id=1006380 FQT45_RS02945 WP_077322251.1 568204..570417(+) (comEC/celB) [Streptococcus pseudoporcinus strain NCTC10228]
MPLIQIVYLIIFSYYTVRFPSTPIIIVDILLICLAIKHYKRRIVPWLLCLLVSTVCLFSYWQWQENKDYKQQPETISQVR
LIPDTVAINGDSLTFIGEHKHHKYKLFYKIKSERELVFFRENRDYLDILSEIPLEEAESVRNFSGFDYRAFLKYQGIYRT
GYIKGLSHLSKSPARNLIEIMRTWRRQAIIICQKEFPKPMSDYMTGLLFGYLDKSFGEMTQIYSPLGIIHLFALSGMQVT
FFLNYFRKLLVIVGVPRDYFPYLDILFSLFYALMTGFSISVLRSLCQSNLRNFGIKGLNNFALAFLLIFICDRQFLLSIG
GVLSFAYAFFITILHFENFEGIRRKVYETFALNLCLLPFLISYFSQFNAVAIFLTILFSFLFDNIILPILCVTFLLSPLI
KCSIFNSLFLLMEKLVHFIGSYTSKPITFGNPNLMQFFLLILVIALFVNQLSKKKAIFLPACIIVLLLLSVRTPFLNEIT
LVDVGQGDSILIRDMDNKTLLIDVGGVHHFDGKKAWQKKYRQANAEKTLIPYLKSRGVTKIDYLLLTHTDNDHVGDMEEV
AKNFEVKEILTSQGSLKNMSFINRLRAMQIKTKIVKAGDRLSIMGSYLQVLYPWSIGDGKNNDSLILYGHLLGKNFLFTG
DIEADGEKALIQRYPNLKVDILKVGHHGSKGSSTEDFLNTVSTKIALISAGKNNAFRHPNPETLERFRERHVKVYRTDQQ
GAIRFTGRSQWKIETCR

Nucleotide

• Length: 2214 bp

>NTDB_id=1006380 FQT45_RS02945 WP_077322251.1 568204..570417(+) (comEC/celB) [Streptococcus pseudoporcinus strain NCTC10228]
ATGCCTTTAATTCAGATTGTCTACCTTATCATCTTTTCTTATTACACAGTTCGTTTCCCCAGTACTCCTATTATAATTGT
AGACATTTTACTAATCTGTCTAGCCATCAAACATTATAAAAGACGAATTGTCCCTTGGTTGTTGTGTCTTTTAGTCTCAA
CAGTGTGTCTATTTAGCTATTGGCAGTGGCAAGAAAATAAAGATTATAAGCAACAACCAGAGACTATTAGTCAAGTTAGA
CTCATTCCAGATACAGTCGCCATTAATGGAGACTCCTTAACCTTCATTGGGGAGCATAAGCATCATAAGTATAAGCTTTT
TTATAAAATAAAAAGTGAGAGGGAATTGGTCTTTTTTAGGGAAAACAGAGACTATCTAGACATTCTTTCTGAAATACCAT
TGGAAGAGGCTGAGAGCGTTCGCAATTTTTCAGGGTTTGATTACCGAGCATTTCTAAAATATCAAGGGATATATCGTACG
GGCTATATAAAAGGATTAAGTCACTTATCAAAAAGTCCAGCTAGGAATCTAATAGAAATAATGCGAACCTGGCGACGTCA
GGCTATCATAATATGTCAAAAAGAATTTCCAAAACCAATGTCGGATTATATGACAGGACTTTTATTTGGCTATTTAGATA
AATCTTTTGGTGAAATGACCCAGATTTATAGTCCACTAGGGATTATTCATCTTTTTGCCTTATCGGGAATGCAAGTTACT
TTTTTCCTTAACTATTTTCGTAAGCTATTGGTCATTGTAGGCGTTCCTAGAGACTACTTTCCTTATTTAGATATTCTGTT
TTCTTTGTTTTATGCTCTTATGACAGGTTTTAGCATTTCTGTTTTACGAAGTTTGTGTCAAAGTAATCTAAGAAATTTTG
GTATTAAGGGGCTTAACAATTTTGCTTTGGCTTTCTTGCTTATCTTTATTTGCGATCGTCAATTTCTACTGAGCATTGGT
GGCGTTCTATCCTTTGCCTATGCTTTTTTTATTACAATTCTTCATTTTGAAAATTTTGAAGGGATTAGGAGAAAAGTTTA
CGAAACTTTCGCTTTAAATCTTTGTCTCCTACCATTTTTAATTAGTTATTTTTCACAATTTAATGCAGTAGCTATTTTCC
TGACCATTCTTTTTTCTTTTCTATTTGATAATATTATCCTGCCTATCTTATGCGTAACCTTTCTTTTATCGCCATTGATA
AAATGCAGTATCTTTAATAGTTTGTTTTTGCTTATGGAAAAACTAGTTCATTTTATTGGAAGTTACACTAGTAAACCGAT
TACTTTTGGGAATCCAAATTTAATGCAATTTTTCTTACTTATCCTAGTTATTGCTCTTTTTGTCAATCAACTCTCTAAAA
AGAAAGCTATTTTCTTACCGGCTTGTATAATTGTCTTGCTCTTATTGAGTGTGAGAACCCCCTTCCTTAATGAAATTACT
CTTGTAGATGTTGGACAAGGAGATAGTATTTTAATTCGAGATATGGATAACAAAACCCTTTTAATTGATGTCGGTGGTGT
ACACCATTTTGACGGGAAAAAGGCTTGGCAAAAAAAGTATAGACAAGCAAATGCTGAGAAAACTCTGATTCCCTATCTTA
AGTCAAGGGGAGTTACAAAAATTGATTATTTACTACTGACTCATACCGATAATGATCATGTCGGAGATATGGAGGAAGTT
GCCAAAAACTTTGAAGTTAAAGAGATTTTAACGAGTCAGGGAAGCTTAAAAAATATGAGTTTTATCAACAGGCTTAGAGC
TATGCAAATTAAAACAAAAATAGTTAAGGCTGGTGACCGACTTTCTATCATGGGGAGTTATTTACAGGTTCTTTATCCAT
GGTCTATAGGAGATGGTAAAAATAATGACTCTTTAATTTTATATGGCCATTTATTAGGGAAAAATTTTCTTTTTACTGGT
GATATTGAAGCAGACGGTGAAAAAGCTTTAATTCAAAGGTATCCAAACTTAAAAGTTGATATTTTAAAAGTAGGCCATCA
TGGTTCAAAAGGATCCTCTACTGAAGATTTTCTAAATACAGTATCAACGAAGATTGCTTTGATTTCCGCTGGTAAAAATA
ATGCCTTTAGGCATCCTAATCCCGAAACTTTAGAACGCTTTCGGGAGCGACATGTCAAGGTCTATCGAACGGATCAACAA
GGTGCCATACGATTTACCGGACGGAGCCAGTGGAAAATTGAGACTTGCCGCTAA

Domains

Predicted by InterProScan.

• Domain of unknown function (DUF4131) (DUF4131) (29-165)

• Metallo-beta-lactamase superfamily (Lactamase_B) (483-569)

• Competence protein (Competence) (207-450)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis NCTC 12261	45.43	100	0.459
comEC/celB	Streptococcus mitis SK321	45.235	100	0.457
comEC/celB	Streptococcus pneumoniae Rx1	44.295	100	0.448
comEC/celB	Streptococcus pneumoniae D39	44.295	100	0.448
comEC/celB	Streptococcus pneumoniae R6	44.295	100	0.448
comEC/celB	Streptococcus pneumoniae TIGR4	44.027	100	0.445
comEC	Lactococcus lactis subsp. cremoris KW2	42.838	100	0.43