Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ABGM96_RS24265 Genome accession   NZ_CP157360
Coordinates   4957802..4958752 (-) Length   316 a.a.
NCBI ID   WP_048688135.1    Uniprot ID   A0A9X9EQY9
Organism   Peribacillus frigoritolerans strain C1141     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4952802..4963752
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABGM96_RS24250 - 4954954..4955898 (-) 945 WP_202186180.1 siderophore ABC transporter substrate-binding protein -
  ABGM96_RS24255 - 4956110..4956868 (-) 759 WP_034310071.1 ABC transporter ATP-binding protein -
  ABGM96_RS24260 - 4956862..4957809 (-) 948 WP_048688138.1 iron chelate uptake ABC transporter family permease subunit -
  ABGM96_RS24265 ceuB 4957802..4958752 (-) 951 WP_048688135.1 ABC transporter permease Machinery gene
  ABGM96_RS24270 - 4959018..4959359 (+) 342 WP_226990537.1 DUF1450 domain-containing protein -
  ABGM96_RS24275 - 4959578..4961227 (+) 1650 WP_375564006.1 M14 family metallopeptidase -
  ABGM96_RS24280 shc 4961394..4963289 (+) 1896 WP_202186170.1 squalene--hopene cyclase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34907.25 Da        Isoelectric Point: 9.6490

>NTDB_id=1006287 ABGM96_RS24265 WP_048688135.1 4957802..4958752(-) (ceuB) [Peribacillus frigoritolerans strain C1141]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLNLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYLSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKLIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1006287 ABGM96_RS24265 WP_048688135.1 4957802..4958752(-) (ceuB) [Peribacillus frigoritolerans strain C1141]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTTTATCATTTACGTCATTATTCATTGGTGTAAAAGATATTACCCC
CCTGGATTTATTGAATCTAAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTCCCCAGAATGGTGACCATAGTCA
TTGCCGGTATTGTGATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTATCCCCGACGACTGCC
GGTACCATGGACTCTGCAAGGCTGGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATCT
TCATTCCATTGGTTGGTTTGATGTTTGGTAATATCGTAGGATCGATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACATGGATGAATGGTGATTTCTCGATGATCATGTCGGGAAGGTACGAGCTTATATATCTAAGTATCCC
GCTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGTGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGCTTATAGTCAATTTTGGATTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCGAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTGCTAGGGGCAGTCTTCCTATTGATCTGCGATATTCTGGGCAGGATCCTCATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTGATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.316

100

0.503

Multiple sequence alignment