Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABHF33_RS06845 Genome accession   NZ_CP157355
Coordinates   1456506..1456889 (-) Length   127 a.a.
NCBI ID   WP_348946222.1    Uniprot ID   A0AAU7FEA7
Organism   Chitinibacter sp. FCG-7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1451506..1461889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABHF33_RS06830 (ABHF33_06830) - 1453364..1455427 (-) 2064 WP_348946218.1 methyl-accepting chemotaxis protein -
  ABHF33_RS06835 (ABHF33_06835) - 1455579..1456052 (-) 474 WP_348946220.1 chemotaxis protein CheW -
  ABHF33_RS06840 (ABHF33_06840) - 1456116..1456478 (-) 363 WP_157315073.1 response regulator -
  ABHF33_RS06845 (ABHF33_06845) pilG 1456506..1456889 (-) 384 WP_348946222.1 twitching motility response regulator PilG Regulator
  ABHF33_RS06850 (ABHF33_06850) yihA 1457198..1457827 (-) 630 WP_348946224.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
  ABHF33_RS06855 (ABHF33_06855) - 1457961..1458575 (+) 615 WP_348946226.1 c-type cytochrome -
  ABHF33_RS06860 (ABHF33_06860) - 1458647..1460671 (+) 2025 WP_348946227.1 cytochrome c biogenesis protein ResB -
  ABHF33_RS06865 (ABHF33_06865) ccsB 1460677..1461795 (+) 1119 WP_348946228.1 c-type cytochrome biogenesis protein CcsB -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 13852.16 Da        Isoelectric Point: 7.8848

>NTDB_id=1006239 ABHF33_RS06845 WP_348946222.1 1456506..1456889(-) (pilG) [Chitinibacter sp. FCG-7]
MSNLAGVKVMVIDDSNTIRRSAEIFLGQAGCEVILAEDGFDALAKIADHHPAVIFVDVMMPRLDGYQTCSLIKKNPRFKA
TPVVMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLAAVRVHAGIV

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1006239 ABHF33_RS06845 WP_348946222.1 1456506..1456889(-) (pilG) [Chitinibacter sp. FCG-7]
ATGTCCAATTTAGCGGGTGTAAAGGTCATGGTAATTGACGATAGCAATACCATTCGCCGCAGCGCTGAAATTTTTCTAGG
GCAAGCAGGGTGTGAAGTCATTCTGGCTGAGGATGGATTTGATGCCCTAGCGAAAATCGCTGATCATCATCCTGCCGTGA
TTTTTGTTGATGTGATGATGCCACGTCTGGATGGTTACCAGACTTGCTCCTTGATCAAGAAAAACCCCCGTTTCAAGGCT
ACTCCGGTGGTCATGCTCTCCTCCAAGGATGGCTTGTTTGATCGTGCACGTGGCCGCATGGTGGGTTCGGACGAGTATCT
GACCAAGCCATTTACCAAAGACAGTTTGTTAGCCGCGGTGCGTGTGCACGCGGGTATTGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.667

94.488

0.63

Multiple sequence alignment