Detailed information NTG0100623

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PCN061_RS20550
• Genome accession: NZ_CP006636
• Coordinates: 4087166..4088191 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli PCN061
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4082166..4093191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCN061_RS20520 (PCN061_4067)	zapB	4082250..4082495 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
PCN061_RS20525 (PCN061_4068)	rraA	4082580..4083065 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PCN061_RS20530 (PCN061_4069)	menA	4083158..4084084 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PCN061_RS20535 (PCN061_4070)	hslU	4084151..4085482 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PCN061_RS20540 (PCN061_4071)	hslV	4085492..4086022 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PCN061_RS20545 (PCN061_4072)	ftsN	4086115..4087074 (-)	960	WP_000068828.1	cell division protein FtsN	-
PCN061_RS20550 (PCN061_4073)	cytR	4087166..4088191 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PCN061_RS20555 (PCN061_4074)	priA	4088347..4090545 (-)	2199	WP_047928928.1	primosomal protein N'	Machinery gene
PCN061_RS20560 (PCN061_4075)	rpmE	4090748..4090960 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
PCN061_RS20565 (PCN061_4076)	-	4091015..4091638 (-)	624	WP_000720774.1	TIGR02117 family protein	-
PCN061_RS20570 (PCN061_4077)	yiiX	4091645..4092253 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
PCN061_RS20575 (PCN061_4078)	metJ	4092437..4092754 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=100623 PCN061_RS20550 WP_000644904.1 4087166..4088191(-) (cytR) [Escherichia coli PCN061]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=100623 PCN061_RS20550 WP_000644904.1 4087166..4088191(-) (cytR) [Escherichia coli PCN061]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628