Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   ABG082_RS11150 Genome accession   NZ_CP157353
Coordinates   2175454..2176257 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus sp. BS1807G30     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2170454..2181257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABG082_RS11135 (ABG082_11135) - 2172670..2172906 (+) 237 WP_008342229.1 DUF2627 domain-containing protein -
  ABG082_RS11140 (ABG082_11140) - 2172940..2173677 (-) 738 WP_008342228.1 glycerophosphodiester phosphodiesterase -
  ABG082_RS11145 (ABG082_11145) - 2173904..2175004 (-) 1101 WP_007501159.1 Rap family tetratricopeptide repeat protein -
  ABG082_RS11150 (ABG082_11150) spo0A 2175454..2176257 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  ABG082_RS11155 (ABG082_11155) spoIVB 2176541..2177818 (-) 1278 WP_025207604.1 SpoIVB peptidase -
  ABG082_RS11160 (ABG082_11160) recN 2178017..2179750 (-) 1734 WP_008342224.1 DNA repair protein RecN Machinery gene
  ABG082_RS11165 (ABG082_11165) argR 2179785..2180234 (-) 450 WP_007501163.1 transcriptional regulator ArgR -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=1006171 ABG082_RS11150 WP_008342226.1 2175454..2176257(-) (spo0A) [Bacillus sp. BS1807G30]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1006171 ABG082_RS11150 WP_008342226.1 2175454..2176257(-) (spo0A) [Bacillus sp. BS1807G30]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCGGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACAATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGTTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCCTCACTCTTTGGTTACACGGTC
AGCATGTCAAAAGCCAAACCAACCAATTCAGAATTTATTGCGATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment