Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ABG082_RS06875 Genome accession   NZ_CP157353
Coordinates   1339858..1340439 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus sp. BS1807G30     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1334858..1345439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABG082_RS06850 (ABG082_06850) - 1335522..1336700 (+) 1179 WP_048001606.1 N-acetyldiaminopimelate deacetylase -
  ABG082_RS06855 (ABG082_06855) - 1336751..1336993 (+) 243 WP_003211408.1 YkuS family protein -
  ABG082_RS06860 (ABG082_06860) - 1337018..1337827 (-) 810 WP_348936702.1 mechanosensitive ion channel family protein -
  ABG082_RS06865 (ABG082_06865) ahpA 1338099..1338641 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  ABG082_RS06870 (ABG082_06870) - 1338918..1339376 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  ABG082_RS06875 (ABG082_06875) rok 1339858..1340439 (+) 582 WP_007498648.1 hypothetical protein Regulator
  ABG082_RS06880 (ABG082_06880) - 1340502..1341419 (-) 918 WP_058213811.1 hypothetical protein -
  ABG082_RS06885 (ABG082_06885) - 1341503..1342084 (+) 582 WP_282833582.1 molybdenum cofactor guanylyltransferase -
  ABG082_RS06890 (ABG082_06890) - 1342114..1343130 (+) 1017 WP_348936703.1 ThiF family adenylyltransferase -
  ABG082_RS06895 (ABG082_06895) glp 1343140..1344414 (+) 1275 WP_348936704.1 gephyrin-like molybdotransferase Glp -
  ABG082_RS06900 (ABG082_06900) mobB 1344396..1344923 (+) 528 WP_348936705.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  ABG082_RS06905 (ABG082_06905) - 1344916..1345407 (+) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=1006163 ABG082_RS06875 WP_007498648.1 1339858..1340439(+) (rok) [Bacillus sp. BS1807G30]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=1006163 ABG082_RS06875 WP_007498648.1 1339858..1340439(+) (rok) [Bacillus sp. BS1807G30]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment