Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ABG082_RS05110 Genome accession   NZ_CP157353
Coordinates   1005170..1006120 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus sp. BS1807G30     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1000170..1011120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABG082_RS05090 (ABG082_05090) - 1001406..1001888 (+) 483 WP_008348662.1 hypothetical protein -
  ABG082_RS05095 (ABG082_05095) - 1001919..1003358 (-) 1440 WP_019743338.1 PLP-dependent aminotransferase family protein -
  ABG082_RS05100 (ABG082_05100) - 1003502..1004671 (+) 1170 WP_017366962.1 MFS transporter -
  ABG082_RS05105 (ABG082_05105) - 1004734..1005012 (+) 279 WP_019743339.1 barstar family protein -
  ABG082_RS05110 (ABG082_05110) ceuB 1005170..1006120 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  ABG082_RS05115 (ABG082_05115) - 1006113..1007063 (+) 951 WP_025207102.1 iron chelate uptake ABC transporter family permease subunit -
  ABG082_RS05120 (ABG082_05120) - 1007054..1007812 (+) 759 WP_081114757.1 ATP-binding cassette domain-containing protein -
  ABG082_RS05125 (ABG082_05125) - 1007835..1008779 (+) 945 WP_125589106.1 siderophore ABC transporter substrate-binding protein -
  ABG082_RS05130 (ABG082_05130) - 1008919..1009875 (+) 957 WP_008348636.1 LCP family protein -
  ABG082_RS05135 (ABG082_05135) - 1009911..1010345 (-) 435 WP_224559575.1 enoyl-CoA hydratase -
  ABG082_RS05140 (ABG082_05140) - 1010433..1010795 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=1006150 ABG082_RS05110 WP_017366964.1 1005170..1006120(+) (ceuB) [Bacillus sp. BS1807G30]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1006150 ABG082_RS05110 WP_017366964.1 1005170..1006120(+) (ceuB) [Bacillus sp. BS1807G30]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAGTTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTCAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTACAAGGGGATTTTTCTCTTATTGTTCAGGGACGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTTGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment