Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ABG082_RS00255 | Genome accession | NZ_CP157353 |
| Coordinates | 47047..47337 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus sp. BS1807G30 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 42047..52337
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABG082_RS00215 (ABG082_00215) | - | 42080..42409 (+) | 330 | WP_012008640.1 | cyclic-di-AMP receptor | - |
| ABG082_RS00220 (ABG082_00220) | - | 42422..42862 (+) | 441 | WP_008341898.1 | YaaR family protein | - |
| ABG082_RS00225 (ABG082_00225) | holB | 42874..43863 (+) | 990 | WP_007496231.1 | DNA polymerase III subunit delta' | - |
| ABG082_RS00230 (ABG082_00230) | - | 43866..44693 (+) | 828 | WP_007496230.1 | stage 0 sporulation family protein | - |
| ABG082_RS00235 (ABG082_00235) | yabA | 44708..45061 (+) | 354 | WP_007496228.1 | DNA replication initiation control protein YabA | - |
| ABG082_RS00240 (ABG082_00240) | - | 45117..45860 (+) | 744 | WP_046527641.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ABG082_RS00245 (ABG082_00245) | - | 45847..46146 (+) | 300 | WP_017359327.1 | GIY-YIG nuclease family protein | - |
| ABG082_RS00250 (ABG082_00250) | rsmI | 46121..47002 (+) | 882 | WP_317328423.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ABG082_RS00255 (ABG082_00255) | abrB | 47047..47337 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| ABG082_RS00260 (ABG082_00260) | metG | 47857..49857 (+) | 2001 | WP_008341884.1 | methionine--tRNA ligase | - |
| ABG082_RS00265 (ABG082_00265) | - | 49939..50706 (+) | 768 | WP_348936422.1 | TatD family hydrolase | - |
| ABG082_RS00270 (ABG082_00270) | - | 50951..52153 (+) | 1203 | WP_272512064.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=1006140 ABG082_RS00255 WP_087975202.1 47047..47337(-) (abrB) [Bacillus sp. BS1807G30]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=1006140 ABG082_RS00255 WP_087975202.1 47047..47337(-) (abrB) [Bacillus sp. BS1807G30]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAGCTTCGCCGTAC
GTTAGGAATCGCAGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAGCTTCGCCGTAC
GTTAGGAATCGCAGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |