Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   FGL23_RS08655 Genome accession   NZ_LR594049
Coordinates   1802775..1803233 (-) Length   152 a.a.
NCBI ID   WP_012130789.1    Uniprot ID   A8AZ12
Organism   Streptococcus gordonii strain NCTC10231     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1797775..1808233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL23_RS08640 (NCTC10231_01724) manA 1798165..1799109 (-) 945 WP_012130786.1 mannose-6-phosphate isomerase, class I -
  FGL23_RS08645 (NCTC10231_01725) rcrQ 1799269..1801026 (-) 1758 WP_061603332.1 ABC transporter ATP-binding protein Regulator
  FGL23_RS08650 (NCTC10231_01726) rcrP 1801016..1802782 (-) 1767 WP_045504223.1 ABC transporter ATP-binding protein Regulator
  FGL23_RS08655 (NCTC10231_01727) rcrR 1802775..1803233 (-) 459 WP_012130789.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FGL23_RS08660 (NCTC10231_01728) - 1803506..1804075 (-) 570 WP_060553896.1 hypothetical protein -
  FGL23_RS08665 (NCTC10231_01729) - 1804085..1804495 (-) 411 WP_060553895.1 peptide deformylase -
  FGL23_RS08670 (NCTC10231_01730) scrK 1804544..1805443 (-) 900 WP_045773521.1 fructokinase ScrK -
  FGL23_RS08675 (NCTC10231_01731) - 1805685..1806215 (-) 531 WP_061603453.1 hypothetical protein -
  FGL23_RS08680 (NCTC10231_01732) glmS 1806331..1808142 (-) 1812 WP_061603333.1 glutamine--fructose-6-phosphate transaminase (isomerizing) -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17556.33 Da        Isoelectric Point: 8.5458

>NTDB_id=1006113 FGL23_RS08655 WP_012130789.1 1802775..1803233(-) (rcrR) [Streptococcus gordonii strain NCTC10231]
MEKPLLEFKRFGRKTQRIIEKRAKVCGMEFMGGPQGQVLHIVSHRAKRGLSTFIRDIEHELDISKSVASNLIKRMEKNGS
IFLEVSETDKRAKMIHLTAQSKQQLKELHDFFNEIDRCLLQGVSEEELATFTLVMAKFHQNIEKLESEDANV

Nucleotide


Download         Length: 459 bp        

>NTDB_id=1006113 FGL23_RS08655 WP_012130789.1 1802775..1803233(-) (rcrR) [Streptococcus gordonii strain NCTC10231]
TTGGAAAAGCCTTTATTAGAATTCAAACGCTTTGGCAGAAAAACTCAACGGATCATAGAGAAACGCGCTAAGGTTTGTGG
GATGGAATTTATGGGAGGTCCACAAGGTCAAGTTCTTCATATCGTATCTCACCGAGCGAAGAGAGGACTTTCGACCTTTA
TTAGGGATATTGAGCATGAGTTAGATATTTCTAAGTCGGTGGCCAGCAATCTAATCAAACGGATGGAAAAAAATGGATCC
ATCTTTCTTGAGGTAAGCGAGACAGATAAAAGGGCCAAGATGATTCATTTAACAGCCCAGTCTAAACAACAATTGAAAGA
GTTACATGATTTTTTTAATGAAATCGATCGCTGTCTCCTCCAGGGTGTTTCAGAAGAAGAATTGGCAACCTTCACTCTGG
TTATGGCGAAATTCCACCAAAATATTGAGAAATTAGAAAGCGAGGATGCCAATGTTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AZ12

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

40.411

96.053

0.388

Multiple sequence alignment