Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   FGL22_RS06410 Genome accession   NZ_LR594048
Coordinates   1264439..1264918 (-) Length   159 a.a.
NCBI ID   WP_003058929.1    Uniprot ID   A0ABU0AAE0
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC11556     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1259439..1269918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL22_RS06390 (NCTC11556_01333) - 1259738..1260079 (-) 342 WP_003054176.1 hypothetical protein -
  FGL22_RS06395 (NCTC11556_01334) - 1260257..1261909 (+) 1653 WP_014612356.1 NFACT family protein -
  FGL22_RS06400 (NCTC11556_01335) - 1261972..1263219 (-) 1248 WP_014612357.1 CDC27 family protein -
  FGL22_RS06405 (NCTC11556_01336) - 1263209..1264390 (-) 1182 WP_014612358.1 AI-2E family transporter -
  FGL22_RS06410 (NCTC11556_01337) mutX 1264439..1264918 (-) 480 WP_003058929.1 8-oxo-dGTP diphosphatase Machinery gene
  FGL22_RS06415 (NCTC11556_01338) - 1265114..1265305 (+) 192 WP_003058922.1 hypothetical protein -
  FGL22_RS06420 - 1265393..1265761 (-) 369 WP_227985721.1 CPBP family intramembrane glutamic endopeptidase -
  FGL22_RS10885 (NCTC11556_01339) - 1265724..1266089 (-) 366 WP_065355348.1 hypothetical protein -
  FGL22_RS06425 (NCTC11556_01340) rfbB 1266278..1267321 (-) 1044 WP_014612360.1 dTDP-glucose 4,6-dehydratase -
  FGL22_RS06430 (NCTC11556_01341) - 1267565..1268158 (-) 594 WP_002990099.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  FGL22_RS06435 (NCTC11556_01342) rfbA 1268158..1269027 (-) 870 WP_003057684.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18574.75 Da        Isoelectric Point: 4.2471

>NTDB_id=1005992 FGL22_RS06410 WP_003058929.1 1264439..1264918(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11556]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=1005992 FGL22_RS06410 WP_003058929.1 1264439..1264918(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11556]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGGAAGTGGATTTCAGTTGGAGGCAAGCTTGAAGCGGGAGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686