Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   FGL18_RS06335 Genome accession   NZ_LR594046
Coordinates   1305618..1306097 (-) Length   159 a.a.
NCBI ID   WP_138125832.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain NCTC6403     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1300618..1311097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL18_RS06320 (NCTC6403_01308) fbp54 1301437..1303089 (+) 1653 WP_138125826.1 Rqc2 family fibronectin-binding protein Fbp54 -
  FGL18_RS06325 (NCTC6403_01309) - 1303150..1304397 (-) 1248 WP_138125828.1 CDC27 family protein -
  FGL18_RS06330 (NCTC6403_01310) - 1304387..1305568 (-) 1182 WP_138125830.1 AI-2E family transporter -
  FGL18_RS06335 (NCTC6403_01311) mutX 1305618..1306097 (-) 480 WP_138125832.1 8-oxo-dGTP diphosphatase Machinery gene
  FGL18_RS06340 (NCTC6403_01312) - 1306293..1306484 (+) 192 WP_003058922.1 hypothetical protein -
  FGL18_RS10705 (NCTC6403_01313) - 1306574..1307299 (-) 726 WP_172601441.1 type II CAAX endopeptidase family protein -
  FGL18_RS06350 (NCTC6403_01314) rfbB 1307488..1308531 (-) 1044 WP_138125834.1 dTDP-glucose 4,6-dehydratase -
  FGL18_RS06355 (NCTC6403_01315) - 1308775..1309368 (-) 594 WP_115246111.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  FGL18_RS06360 (NCTC6403_01316) rfbA 1309368..1310237 (-) 870 WP_138125836.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18575.73 Da        Isoelectric Point: 4.2082

>NTDB_id=1005783 FGL18_RS06335 WP_138125832.1 1305618..1306097(-) (mutX) [Streptococcus dysgalactiae strain NCTC6403]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=1005783 FGL18_RS06335 WP_138125832.1 1305618..1306097(-) (mutX) [Streptococcus dysgalactiae strain NCTC6403]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGTGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTTCACGAAGGGAAGTGGATTTCAGTAGGAGGCAAGCTTGAAGCGGGTGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATACGATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.182

100

0.692

Multiple sequence alignment