Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FGL14_RS02765 Genome accession   NZ_LR594045
Coordinates   499635..500444 (+) Length   269 a.a.
NCBI ID   WP_003059746.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 494635..505444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL14_RS02740 (NCTC9413_00559) - 495009..495710 (-) 702 WP_012766679.1 amino acid ABC transporter permease -
  FGL14_RS02745 (NCTC9413_00560) - 495724..496524 (-) 801 WP_003057243.1 transporter substrate-binding domain-containing protein -
  FGL14_RS02750 - 496524..497317 (-) 794 Protein_469 amino acid ABC transporter ATP-binding protein -
  FGL14_RS02755 (NCTC9413_00563) yycF 497576..498286 (+) 711 WP_012766682.1 response regulator YycF -
  FGL14_RS02760 (NCTC9413_00564) vicK 498279..499631 (+) 1353 WP_003060939.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGL14_RS02765 (NCTC9413_00565) vicX 499635..500444 (+) 810 WP_003059746.1 MBL fold metallo-hydrolase Regulator
  FGL14_RS02770 (NCTC9413_00566) rnc 501202..501894 (+) 693 WP_003057240.1 ribonuclease III -
  FGL14_RS02775 (NCTC9413_00567) smc 501895..505440 (+) 3546 WP_003057203.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30157.38 Da        Isoelectric Point: 6.0739

>NTDB_id=1005657 FGL14_RS02765 WP_003059746.1 499635..500444(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1005657 FGL14_RS02765 WP_003059746.1 499635..500444(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTGATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGCGTTAGTCACGATGCGGTTGATCCTC
AGTTTTACCGCATTATGAAGGACAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTCAGTGACCGAATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAGTCCAATCATGACATTGAAATTTTACGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGCCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCGGTAGGTACAGACTTTACTGTTCATGACACTTCCCCAGACACAGCTTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766