Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   FGL06_RS03520 Genome accession   NZ_LR594042
Coordinates   677814..678299 (+) Length   161 a.a.
NCBI ID   WP_021142040.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8133     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 672814..683299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL06_RS03490 (NCTC8133_00701) - 672818..673501 (+) 684 WP_074863537.1 tRNA (adenine(22)-N(1))-methyltransferase -
  FGL06_RS03495 (NCTC8133_00702) - 673491..674279 (+) 789 WP_126437726.1 Nif3-like dinuclear metal center hexameric protein -
  FGL06_RS03500 (NCTC8133_00703) rfbA 674413..675282 (+) 870 WP_004231150.1 glucose-1-phosphate thymidylyltransferase RfbA -
  FGL06_RS03505 (NCTC8133_00704) - 675282..675878 (+) 597 WP_039698361.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  FGL06_RS03510 (NCTC8133_00705) rfbB 676055..677101 (+) 1047 WP_021142038.1 dTDP-glucose 4,6-dehydratase -
  FGL06_RS03515 - 677240..677662 (+) 423 Protein_629 GTP pyrophosphokinase -
  FGL06_RS03520 (NCTC8133_00707) mutX 677814..678299 (+) 486 WP_021142040.1 NUDIX hydrolase Machinery gene
  FGL06_RS03525 (NCTC8133_00708) - 678336..679523 (+) 1188 WP_027968221.1 AI-2E family transporter -
  FGL06_RS03530 (NCTC8133_00709) - 679513..680748 (+) 1236 WP_126438196.1 tetratricopeptide repeat protein -
  FGL06_RS03535 (NCTC8133_00710) - 680732..680914 (+) 183 WP_021142043.1 hypothetical protein -
  FGL06_RS03540 (NCTC8133_00711) alsS 681169..682842 (+) 1674 WP_024344667.1 acetolactate synthase AlsS -

Sequence

Protein


Download         Length: 161 a.a.        Molecular weight: 18880.21 Da        Isoelectric Point: 4.3823

>NTDB_id=1005366 FGL06_RS03520 WP_021142040.1 677814..678299(+) (mutX) [Streptococcus equinus strain NCTC8133]
MTKLATICYIDNGEALLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECAKREIFEETHFIVKEMDFKGVITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDKVLSKPTWEGDYEIFKWILDDVPFFSAKFTYDDQQRLVDKSVTFYDN
K

Nucleotide


Download         Length: 486 bp        

>NTDB_id=1005366 FGL06_RS03520 WP_021142040.1 677814..678299(+) (mutX) [Streptococcus equinus strain NCTC8133]
ATGACAAAGTTAGCAACGATTTGTTATATTGATAACGGTGAGGCACTTTTGCTTTTGCACCGTAATAAAAAGCCAAATGA
TGTTCATGAAGGAAAATGGATTTCAGTTGGTGGTAAGCTTGAAGCAGGTGAGACTCCTGATGAATGCGCAAAGCGTGAAA
TTTTTGAAGAAACTCATTTTATCGTTAAAGAAATGGACTTTAAAGGAGTGATTACTTTTCCAGAATTTACACCTGGTCAT
GATTGGTACACATATGTGTTTAAAGTGACTGATTTTGAGGGTGAGTTGATTTCTGATGAGGAATCACGTGAAGGAACATT
GGAATGGGTTCCTTATGATAAAGTTCTTTCAAAACCGACTTGGGAAGGTGATTATGAAATCTTTAAGTGGATTTTGGATG
ATGTTCCATTCTTTTCAGCTAAATTTACTTATGATGACCAACAACGTTTAGTTGATAAAAGTGTCACTTTCTATGATAAT
AAGTAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.811

98.758

0.689