Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   FGL12_RS08925 Genome accession   NZ_LR594041
Coordinates   1851193..1851651 (-) Length   152 a.a.
NCBI ID   WP_012130789.1    Uniprot ID   A8AZ12
Organism   Streptococcus gordonii strain NCTC9124     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1846193..1856651
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL12_RS08910 (NCTC9124_01796) manA 1846579..1847523 (-) 945 WP_012130786.1 mannose-6-phosphate isomerase, class I -
  FGL12_RS08915 (NCTC9124_01797) rcrQ 1847687..1849444 (-) 1758 WP_012130787.1 ABC transporter ATP-binding protein Regulator
  FGL12_RS08920 (NCTC9124_01798) rcrP 1849434..1851200 (-) 1767 WP_012130788.1 ABC transporter ATP-binding protein Regulator
  FGL12_RS08925 (NCTC9124_01799) rcrR 1851193..1851651 (-) 459 WP_012130789.1 MarR family transcriptional regulator Regulator
  FGL12_RS08930 (NCTC9124_01800) - 1851923..1852492 (-) 570 WP_012130790.1 hypothetical protein -
  FGL12_RS08935 (NCTC9124_01801) - 1852502..1852912 (-) 411 WP_012130791.1 peptide deformylase -
  FGL12_RS08940 (NCTC9124_01802) scrK 1852961..1853860 (-) 900 WP_012130792.1 fructokinase ScrK -
  FGL12_RS08945 (NCTC9124_01803) - 1854101..1854625 (-) 525 WP_012130793.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17556.33 Da        Isoelectric Point: 8.5458

>NTDB_id=1005280 FGL12_RS08925 WP_012130789.1 1851193..1851651(-) (rcrR) [Streptococcus gordonii strain NCTC9124]
MEKPLLEFKRFGRKTQRIIEKRAKVCGMEFMGGPQGQVLHIVSHRAKRGLSTFIRDIEHELDISKSVASNLIKRMEKNGS
IFLEVSETDKRAKMIHLTAQSKQQLKELHDFFNEIDRCLLQGVSEEELATFTLVMAKFHQNIEKLESEDANV

Nucleotide


Download         Length: 459 bp        

>NTDB_id=1005280 FGL12_RS08925 WP_012130789.1 1851193..1851651(-) (rcrR) [Streptococcus gordonii strain NCTC9124]
TTGGAAAAGCCTTTATTAGAATTCAAACGCTTTGGCCGAAAGACTCAACGGATCATAGAGAAAAGAGCCAAGGTTTGTGG
GATGGAATTTATGGGAGGTCCACAAGGTCAAGTTCTTCACATCGTATCTCACCGAGCGAAAAGAGGACTTTCGACCTTTA
TTAGGGATATTGAGCATGAGTTAGATATTTCTAAGTCGGTGGCCAGTAATCTAATCAAACGGATGGAAAAAAATGGATCC
ATCTTTCTTGAGGTAAGCGAGACAGATAAAAGGGCCAAGATGATTCATTTAACAGCCCAGTCCAAACAACAATTAAAAGA
GTTACATGATTTTTTTAATGAAATTGATCGCTGTCTCCTCCAGGGTGTTTCAGAAGAAGAATTGGCAACCTTCACTCTGG
TTATGGCGAAATTCCACCAAAATATTGAGAAATTAGAAAGCGAGGATGCCAATGTTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AZ12

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

40.411

96.053

0.388

Multiple sequence alignment