Detailed information NTG1005170

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABI139_RS09920
• Genome accession: NZ_CP157255
• Coordinates: 2108135..2108836 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2024CK-00452
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2103135..2113836

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABI139_RS09890 (ABI139_09890)	-	2103441..2103884 (-)	444	WP_001246675.1	SRPBCC family protein	-
ABI139_RS09895 (ABI139_09895)	tadA	2103954..2104457 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABI139_RS09900 (ABI139_09900)	-	2104464..2105588 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABI139_RS09905 (ABI139_09905)	ung	2105585..2106298 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABI139_RS09910 (ABI139_09910)	-	2106349..2106945 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABI139_RS09915 (ABI139_09915)	gspK	2107176..2108135 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABI139_RS09920 (ABI139_09920)	xcpW	2108135..2108836 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABI139_RS09925 (ABI139_09925)	xcpV	2108836..2109216 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABI139_RS09930 (ABI139_09930)	-	2109206..2109760 (-)	555	WP_000841373.1	type II secretion system protein	-
ABI139_RS09935 (ABI139_09935)	-	2109770..2110378 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABI139_RS09940 (ABI139_09940)	-	2110416..2111189 (-)	774	WP_000497298.1	TatD family hydrolase	-
ABI139_RS09945 (ABI139_09945)	-	2111207..2111548 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ABI139_RS09950 (ABI139_09950)	-	2111560..2112540 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABI139_RS09955 (ABI139_09955)	kdsB	2112552..2113313 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1005170 ABI139_RS09920 WP_000594589.1 2108135..2108836(-) (xcpW) [Acinetobacter baumannii strain 2024CK-00452]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1005170 ABI139_RS09920 WP_000594589.1 2108135..2108836(-) (xcpW) [Acinetobacter baumannii strain 2024CK-00452]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996