Detailed information NTG0100516

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: PPECC33_RS16270
• Genome accession: NZ_CP006632
• Coordinates: 3300418..3301605 (+)
• Length: 395 a.a.
• NCBI ID: WP_001161839.1
• Uniprot ID: -
• Organism: Escherichia coli PCN033
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3295418..3306605

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PPECC33_RS16255 (PPECC33_03267)	-	3295933..3297609 (+)	1677	WP_001376029.1	polysaccharide biosynthesis/export family protein	-
PPECC33_RS16260 (PPECC33_03268)	kdsB	3297619..3298359 (+)	741	WP_000030762.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PPECC33_RS16265 (PPECC33_03269)	-	3298356..3300383 (+)	2028	WP_000579245.1	capsular polysaccharide biosynthesis protein	-
PPECC33_RS16270 (PPECC33_03270)	kpsS	3300418..3301605 (+)	1188	WP_001161839.1	capsular biosynthesis protein	Regulator
PPECC33_RS16275 (PPECC33_03271)	-	3302274..3303851 (-)	1578	WP_001376030.1	nucleotidyltransferase family protein	-
PPECC33_RS16280 (PPECC33_03272)	-	3303848..3304216 (-)	369	WP_000821214.1	hypothetical protein	-
PPECC33_RS16285 (PPECC33_03273)	-	3304219..3304935 (-)	717	WP_000600935.1	glycosyltransferase family 2 protein	-
PPECC33_RS16290 (PPECC33_03274)	-	3304932..3306302 (-)	1371	WP_000867867.1	hypothetical protein	-

Sequence

Protein

• Length: 395 a.a.
• Molecular weight: 47040.40 Da
• Isoelectric Point: 10.1525

>NTDB_id=100516 PPECC33_RS16270 WP_001161839.1 3300418..3301605(+) (kpsS) [Escherichia coli PCN033]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLTPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKLLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLVKTQVNAVYYGGFKKK

Nucleotide

• Length: 1188 bp

>NTDB_id=100516 PPECC33_RS16270 WP_001161839.1 3300418..3301605(+) (kpsS) [Escherichia coli PCN033]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGATGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGCGGGGATCGTTTTTACTGCC
GTCATCGACAATACCTGGCTTACTACCAGACACCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCACCGACAATATGAC
TTTGACACTATCCTCTGCTTTGGCGACTGCCGCCCATTGCATAAAGAAGCAAAACGGTGGGCAAAGTCGAAAGGTATCCG
CTTCCTGGCATTTGAAGAAGGATATTTACGCCCGCAATTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCATGTTGAGAACTTAACACCTTCAACAATG
AAACGTATTGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGTCATGAGTTTCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGCTATTACCGAGGTTAATGAACGAGTTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTGAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCATGCTAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCAGATATGAAACTGTTTAAGAAGT
TTCGTGGGTATTTATTGGTGAAGACGCAGGTTAATGCGGTTTATTATGGGGGCTTTAAAAAAAAATGA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	40.051	99.241	0.397